RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CCDC47Q96A33 483 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 DHTKD1Q96HY7 919 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 BAG1Q99933 345 aaPredicted RBP7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 REPIN1Q9BWE0 567 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 SRRTQ9BXP5 876 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 POLD4Q9HCU8 107 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 ATP13A2Q9NQ11 1180 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 SPHK2Q9NRA0 654 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 DNAJC17Q9NVM6 304 aaKnown RBP7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 SEL1LQ9UBV2 794 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 ITGB1BP2Q9UKP3 347 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 ACSL6Q9UKU0 697 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 PCDHB5Q9Y5E4 795 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 STAB1Q9NY15 2570 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 UBE4BO95155 1302 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 CITO14578 2027 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 SHANK1Q9Y566 2161 aa7.67□□□□□ -1.18
CTNNA1-227ENST00000521387 CKAP5Q14008 2032 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 A0A1W2PPC4 97 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ZNF840PA6NDX5 716 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 RNF225M0QZC1 329 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 CTIFO43310 598 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 SDC3O75056 442 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 LDLRP01130 860 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ITGA2BP08514 1039 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 GCFC2P16383 781 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ACO1P21399 889 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 PRKCHP24723 683 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 MLLT3P42568 568 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 PDX1P52945 283 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 AMPD3Q01432 767 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 STIM1Q13586 685 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ANO4Q32M45 955 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 HYIQ5T013 277 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 KRT79Q5XKE5 535 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 BTBD8Q5XKL5 378 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ANKRD40Q6AI12 368 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 TRIM65Q6PJ69 517 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 SYT10Q6XYQ8 523 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 UNC13DQ70J99 1090 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 DYMQ7RTS9 669 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 TAS1R3Q7RTX0 852 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 C14orf80Q86SX3 495 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 CREBRFQ8IUR6 639 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 FAM114A1Q8IWE2 563 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 BBS7Q8IWZ6 715 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ARL14Q8N4G2 192 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 RBBP8NLQ8NC74 664 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 KIAA0895Q8NCT3 520 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 SNX29Q8TEQ0 813 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 PDCD6IPQ8WUM4 868 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ZBTB45Q96K62 511 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 PANX2Q96RD6 677 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 NACC1Q96RE7 527 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 NAP1L4Q99733 375 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 THAP9Q9H5L6 903 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ERVMER34-1Q9H9K5 563 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 GDF3Q9NR23 364 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 EXOC1Q9NV70 894 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 THAP10Q9P2Z0 257 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 PCDHGA7Q9Y5G6 932 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ITIH6Q6UXX5 1313 aa7.66□□□□□ -1.18
CTNNA1-227ENST00000521387 ATRQ13535 2644 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 FBN1P35555 2871 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 PVALEFA0A1B0GWK0 134 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 K7EM74 188 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 KIF2AO00139 706 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 PSMA7O14818 248 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 CACNG3O60359 315 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 STX10O60499 249 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 SYNCRIPO60506 623 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 OAS1P00973 400 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 ACADMP11310 421 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 ODC1P11926 461 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 PFKLP17858 780 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 CD38P28907 300 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 NAMPTP43490 491 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 ARRB1P49407 418 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 BCAT1P54687 386 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 DAB2P98082 770 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 SRSF11Q05519 484 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 NAA30Q147X3 362 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 STARD3Q14849 445 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 ZNF568Q3ZCX4 644 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 COBLL1Q53SF7 1204 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 WSCD1Q658N2 575 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 KIAA0895LQ68EN5 471 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 NCAPH2Q6IBW4 605 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 CNNM4Q6P4Q7 775 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 CSPG4Q6UVK1 2322 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 MOXD1Q6UVY6 613 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 RAD9BQ6WBX8 426 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 SPNS3Q6ZMD2 512 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 SLC34A3Q8N130 599 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 WDR36Q8NI36 951 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 C9orf43Q8TAL5 461 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 DEPTORQ8TB45 409 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 ZNF507Q8TCN5 953 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms