RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TBL3Q12788 808 aaKnown RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 TOMM20Q15388 145 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 TIGD2Q4W5G0 525 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZNF766Q5HY98 468 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 SH2D4BQ5SQS7 431 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 MTFR2Q6P444 385 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 Q6ZNX1 250 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZNF551Q7Z340 670 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 KRT27Q7Z3Y8 459 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 WDR53Q7Z5U6 358 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 BCDIN3DQ7Z5W3 292 aaKnown RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 ARMC8Q8IUR7 673 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 NGEFQ8N5V2 710 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 SIRT6Q8N6T7 355 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 KCNG4Q8TDN1 519 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 UCMAQ8WVF2 138 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 TFAP2BQ92481 460 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 SH3KBP1Q96B97 665 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 ERP27Q96DN0 273 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 PERPQ96FX8 193 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 P2RY11Q96G91 374 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 VPS50Q96JG6 964 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 PDLIM2Q96JY6 352 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 BBC3Q96PG8 261 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 ITPAQ9BY32 194 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 TTYH1Q9H313 450 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 PDE11AQ9HCR9 933 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 TXNRD2Q9NNW7 524 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 ARHGEF3Q9NR81 526 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 THAP1Q9NVV9 213 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 KLQ9UEF7 1012 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 BAG5Q9UL15 447 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 PSAT1Q9Y617 370 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3DA0A087WVF3 549 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3IA0A087WXS9 549 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3EA0A087X179 549 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3KA0A087X1G2 549 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3BA6NDS4 549 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3FA6NER0 549 aaPredicted RBP3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 GAGE10A6NGK3 116 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 AGAP14A8MT82 685 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3LB9A6J9 549 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 PEX12O00623 359 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 URI1O94763 535 aaPredicted RBP3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 NXPH3O95157 252 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 CLEC3BP05452 202 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3HP0C7X1 549 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 ITGAMP11215 1152 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 UBL4AP11441 157 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TM4SF1P30408 202 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 CYP2C18P33260 490 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 HNF1BP35680 557 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 PGM1P36871 562 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 STAT6P42226 847 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 GDF5P43026 501 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 POLD2P49005 469 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 SLC37A1P57057 533 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 IRX6P78412 446 aaPredicted RBP3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 DMWDQ09019 674 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 CCDC15Q0P6D6 951 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 MIIPQ5JXC2 388 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 IGFL4Q6B9Z1 124 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3GQ6DHY5 549 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3CQ6IPX1 549 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 WDR93Q6P2C0 686 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 ANKRD16Q6P6B7 361 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 SLC39A5Q6ZMH5 540 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 SYNE3Q6ZMZ3 975 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 GALNT5Q7Z7M9 940 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 SCN4BQ8IWT1 228 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 PALM2Q8IXS6 379 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D3Q8IZP1 549 aaPredicted RBP3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 CCDC89Q8N998 374 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 NFKBIDQ8NI38 313 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZCCHC10Q8TBK6 192 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 C2CD4CQ8TF44 421 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 RUFY2Q8WXA3 655 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 HAS1Q92839 578 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 FBXL20Q96IG2 436 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 EIF3CQ99613 913 aaKnown RBP3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 CENPOQ9BU64 300 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 MRIQ9BWK5 157 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 HDHD5Q9BXW7 423 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 CTDSP1Q9GZU7 261 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 CLPBQ9H078 707 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 SYNPO2LQ9H987 977 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 SLC2A4RGQ9NR83 387 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 PLSCR4Q9NRQ2 329 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 BEX4Q9NWD9 120 aaPredicted RBP3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 POLG2Q9UHN1 485 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 CNOT7Q9UIV1 285 aaKnown RBP3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 ADAMTS5Q9UNA0 930 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 LAS1LQ9Y4W2 734 aaKnown RBP3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 ENTPD2Q9Y5L3 495 aa3.8□□□□□ -1.8
HMGN1P28-201ENST00000521340 ANKRD18BA2A2Z9 1011 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 GRID2IPA4D2P6 1211 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 C3orf70A6NLC5 250 aaPredicted RBP3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 LINC00473A8K010 186 aa3.79□□□□□ -1.8
HMGN1P28-201ENST00000521340 TEX22C9J3V5 150 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 678.8 ms