RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 RNF34Q969K3 372 aa10.57□□□□□ -0.72
TRIM35-204ENST00000521283 PGAP3Q96FM1 320 aaPredicted RBP10.57□□□□□ -0.72
TRIM35-204ENST00000521283 FCRL2Q96LA5 508 aaPredicted RBP10.57□□□□□ -0.72
TRIM35-204ENST00000521283 VPS45Q9NRW7 570 aa10.57□□□□□ -0.72
TRIM35-204ENST00000521283 PLK2Q9NYY3 685 aa10.57□□□□□ -0.72
TRIM35-204ENST00000521283 THAP10Q9P2Z0 257 aaPredicted RBP10.57□□□□□ -0.72
TRIM35-204ENST00000521283 SUN2Q9UH99 717 aa10.57□□□□□ -0.72
TRIM35-204ENST00000521283 CYTH4Q9UIA0 394 aa10.57□□□□□ -0.72
TRIM35-204ENST00000521283 FHOD1Q9Y613 1164 aa10.57□□□□□ -0.72
TRIM35-204ENST00000521283 THADAQ6YHU6 1953 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 TCRBV21S2A2A0A5A6 115 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 PRRT4C9JH25 899 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 AP5Z1O43299 807 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 MSI1O43347 362 aaKnown RBP10.56□□□□□ -0.72
TRIM35-204ENST00000521283 DAB1O75553 588 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 ZNF806P0C7X5 589 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 POLR2EP19388 210 aaKnown RBP10.56□□□□□ -0.72
TRIM35-204ENST00000521283 OXTRP30559 389 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 P2RY2P41231 377 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 ID4P47928 161 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 ZNF165P49910 485 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 JAM2P57087 298 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 POLR2FP61218 127 aaKnown RBP10.56□□□□□ -0.72
TRIM35-204ENST00000521283 CDR2Q01850 454 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 FAM133BQ5BKY9 247 aaKnown RBP10.56□□□□□ -0.72
TRIM35-204ENST00000521283 MS4A13Q5J8X5 152 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 BRMS1LQ5PSV4 323 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 EMC10Q5UCC4 262 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 SYPL2Q5VXT5 272 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 EGFLAMQ63HQ2 1017 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 OLFML1Q6UWY5 402 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 LPCAT2Q7L5N7 544 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 ERMP1Q7Z2K6 904 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 KIAA0907Q7Z7F0 614 aaPredicted RBP10.56□□□□□ -0.72
TRIM35-204ENST00000521283 TAC4Q86UU9 113 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 DEFB106AQ8N104 65 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 MDGA1Q8NFP4 955 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 EPS8L1Q8TE68 723 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 DDX1Q92499 740 aaKnown RBP10.56□□□□□ -0.72
TRIM35-204ENST00000521283 BHMTQ93088 406 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 IQCDQ96DY2 449 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 GANQ9H2C0 597 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 RETREG1Q9H6L5 497 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 FAM204AQ9H8W3 233 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 ACP6Q9NPH0 428 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 FAM207AQ9NSI2 230 aaPredicted RBP10.56□□□□□ -0.72
TRIM35-204ENST00000521283 SEMA4GQ9NTN9 838 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 DDIT4Q9NX09 232 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRIM35-204ENST00000521283 TMEM63CQ9P1W3 806 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 KIAA1522Q9P206 1035 aaPredicted RBP10.56□□□□□ -0.72
TRIM35-204ENST00000521283 USP18Q9UMW8 372 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 SIK3Q9Y2K2 1263 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 STON1Q9Y6Q2 735 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 GPR179Q6PRD1 2367 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 CFAP54Q96N23 3096 aa10.56□□□□□ -0.72
TRIM35-204ENST00000521283 NUP205Q92621 2012 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 A0A1W2PQF6 199 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 F5H5T6 163 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 TERTO14746 1132 aaKnown RBP10.55□□□□□ -0.72
TRIM35-204ENST00000521283 TBL1XO60907 577 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 CALCAP01258 141 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 DLDP09622 509 aaKnown RBP10.55□□□□□ -0.72
TRIM35-204ENST00000521283 PABPC1P11940 636 aaKnown RBP10.55□□□□□ -0.72
TRIM35-204ENST00000521283 DESP17661 470 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 NNMTP40261 264 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 PXNP49023 591 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-204ENST00000521283 ST8SIA6P61647 398 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 APBA1Q02410 837 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 ZBTB16Q05516 673 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 SULT2A1Q06520 285 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 MESP2Q0VG99 397 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 CDH18Q13634 790 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 NCAPHQ15003 741 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 GEN1Q17RS7 908 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 SLC25A52Q3SY17 297 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 PTPN20Q4JDL3 420 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 ANO6Q4KMQ2 910 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 HS1BP3Q53T59 392 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 PMS2CLQ68D20 193 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 CAVIN1Q6NZI2 390 aaKnown RBP10.55□□□□□ -0.72
TRIM35-204ENST00000521283 SERPINA13PQ6UXR4 307 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 FAM183BPQ6ZVS7 135 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 KBTBD6Q86V97 674 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 PASD1Q8IV76 773 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 MFN1Q8IWA4 741 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 KIAA2013Q8IYS2 634 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 C12orf50Q8NA57 414 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-204ENST00000521283 NETO1Q8TDF5 533 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 HMGB4Q8WW32 186 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 NT5C3BQ969T7 300 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 C1orf74Q96LT6 269 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 EDEM3Q9BZQ6 932 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 CIPCQ9C0C6 399 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 DUSP15Q9H1R2 295 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-204ENST00000521283 WDCPQ9H6R7 721 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 GGA2Q9UJY4 613 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 SCML1Q9UN30 329 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 CKAP5Q14008 2032 aa10.55□□□□□ -0.72
TRIM35-204ENST00000521283 FRYLO94915 3013 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms