RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 TOP3BO95985 862 aaKnown RBP4.56□□□□□ -1.68
SQLE-204ENST00000520493 CNPP09543 421 aaKnown RBP4.56□□□□□ -1.68
SQLE-204ENST00000520493 GYS1P13807 737 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 CAPN3P20807 821 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 DGKQP52824 942 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 PSG6Q00889 435 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 GHRHRQ02643 423 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 CHRNDQ07001 517 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 LMAN2Q12907 356 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 CUL4BQ13620 913 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 FHL3Q13643 280 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 GRM4Q14833 912 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 DAZAP2Q15038 168 aaPredicted RBP4.56□□□□□ -1.68
SQLE-204ENST00000520493 ST3GAL2Q16842 350 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 MAP3K21Q5TCX8 1036 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 VSTM1Q6UX27 236 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 CPOQ8IVL8 374 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 ESX1Q8N693 406 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 Q8N9P0 234 aaPredicted RBP4.56□□□□□ -1.68
SQLE-204ENST00000520493 AFG1LQ8WV93 481 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 HDAC2Q92769 488 aaKnown RBP4.56□□□□□ -1.68
SQLE-204ENST00000520493 HMCESQ96FZ2 354 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 VPS50Q96JG6 964 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 TMEM79Q9BSE2 394 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 OSBPL5Q9H0X9 879 aaPredicted RBP4.56□□□□□ -1.68
SQLE-204ENST00000520493 TMEM160Q9NX00 188 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 ELOVL5Q9NYP7 299 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 POLG2Q9UHN1 485 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 CNTN6Q9UQ52 1028 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 PRSS47A8MTI9 375 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 A8MVJ9 347 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 E5RJQ4 531 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 TSPAN3O60637 253 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 HTR7P34969 479 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 DIO1P49895 249 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 LAMB3Q13751 1172 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 KCNB1Q14721 858 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 LARS2Q15031 903 aaKnown RBP4.55□□□□□ -1.68
SQLE-204ENST00000520493 ANKRD1Q15327 319 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 ANO7Q6IWH7 933 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 FAM180BQ6P0A1 224 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 DCDC5Q6ZRR9 648 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 BRINP3Q76B58 766 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 MRPL10Q7Z7H8 261 aaKnown RBP4.55□□□□□ -1.68
SQLE-204ENST00000520493 NANOGP1Q8N7R0 232 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 PCYOX1LQ8NBM8 494 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 OSR1Q8TAX0 266 aaPredicted RBP4.55□□□□□ -1.68
SQLE-204ENST00000520493 ZBTB45Q96K62 511 aaPredicted RBP4.55□□□□□ -1.68
SQLE-204ENST00000520493 EPS8L2Q9H6S3 715 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 ELAC1Q9H777 363 aaKnown RBP4.55□□□□□ -1.68
SQLE-204ENST00000520493 LIN7CQ9NUP9 197 aaKnown RBP4.55□□□□□ -1.68
SQLE-204ENST00000520493 TRNAU1APQ9NX07 287 aaKnown RBP4.55□□□□□ -1.68
SQLE-204ENST00000520493 ASIC5Q9NY37 505 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 GGA3Q9NZ52 723 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 CLIC5Q9NZA1 410 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 RIMKLBQ9ULI2 386 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 SLC27A6Q9Y2P4 619 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 DERAQ9Y315 318 aa4.55□□□□□ -1.68
SQLE-204ENST00000520493 DYTNA2CJ06 578 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 E7EVH7 732 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 F5H0A9 414 aaPredicted RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 K7ENM7 598 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 SEPT4O43236 478 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 WDR47O94967 919 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 DDX58O95786 925 aaKnown RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 CD4P01730 458 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 POLBP06746 335 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 HGFP14210 728 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 SFPQP23246 707 aaKnown RBP eCLIP4.54□□□□□ -1.68
SQLE-204ENST00000520493 ATP5F1P24539 256 aaPredicted RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 KLRK1P26718 216 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 SERPINA4P29622 427 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 KRT9P35527 623 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 PRKAA2P54646 552 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.54□□□□□ -1.68
SQLE-204ENST00000520493 KCNJ12Q14500 433 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 RABEP1Q15276 862 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 CC2D1BQ5T0F9 858 aaKnown RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 DSTYKQ6XUX3 929 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 C4orf50Q6ZRC1 276 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 RASGRP2Q7LDG7 609 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 TBC1D1Q86TI0 1168 aaPredicted RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 FSTL5Q8N475 847 aaPredicted RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 C1orf131Q8NDD1 294 aaKnown RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 MAFAQ8NHW3 353 aaPredicted RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 C3orf49Q96BT1 292 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 ERP27Q96DN0 273 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 ZBTB10Q96DT7 871 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 ZNF48Q96MX3 618 aaPredicted RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 TWNKQ96RR1 684 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 BRD8Q9H0E9 1235 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 FSCN3Q9NQT6 498 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 TBC1D22BQ9NU19 505 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 IFT80Q9P2H3 777 aaPredicted RBP4.54□□□□□ -1.68
SQLE-204ENST00000520493 ASAP1Q9ULH1 1129 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 SLC45A1Q9Y2W3 748 aa4.54□□□□□ -1.68
SQLE-204ENST00000520493 B4E171 279 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 TCERG1O14776 1098 aaKnown RBP4.53□□□□□ -1.68
SQLE-204ENST00000520493 CTIFO43310 598 aaKnown RBP4.53□□□□□ -1.68
SQLE-204ENST00000520493 SPRY2O43597 315 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms