RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 CSKP41240 450 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 CTSKP43235 329 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 C21orf59P57076 290 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 RPS24P62847 133 aaKnown RBP20.78■□□□□ 0.92
HDAC2-207ENST00000520170 CNGA2Q16280 664 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 DHX40Q8IX18 779 aaKnown RBP20.78■□□□□ 0.92
HDAC2-207ENST00000520170 CARNMT1Q8N4J0 409 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 ZNF557Q8N988 423 aaPredicted RBP20.78■□□□□ 0.92
HDAC2-207ENST00000520170 HJURPQ8NCD3 748 aaPredicted RBP20.78■□□□□ 0.92
HDAC2-207ENST00000520170 FIBINQ8TAL6 211 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 TTC17Q96AE7 1141 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 MYEOVQ96EZ4 313 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 MYO19Q96H55 970 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 LMLNQ96KR4 655 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 NT5C1BQ96P26 610 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 ZSWIM1Q9BR11 485 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 ORAI3Q9BRQ5 295 aa20.78■□□□□ 0.92
HDAC2-207ENST00000520170 IRX2Q9BZI1 471 aaPredicted RBP20.78■□□□□ 0.92
HDAC2-207ENST00000520170 ASXL3Q9C0F0 2248 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 RNASEH1O60930 286 aaKnown RBP20.77■□□□□ 0.92
HDAC2-207ENST00000520170 SIN3BO75182 1162 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 FMO5P49326 533 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 CYP4F3Q08477 520 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 PRAMEF14Q5SWL7 426 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 USP30Q70CQ3 517 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 CFAP52Q8N1V2 620 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 PPM1KQ8N3J5 372 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 ENGASEQ8NFI3 743 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 ERCC4Q92889 916 aaPredicted RBP20.77■□□□□ 0.92
HDAC2-207ENST00000520170 AZIN2Q96A70 460 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 PRICKLE1Q96MT3 831 aaPredicted RBP20.77■□□□□ 0.92
HDAC2-207ENST00000520170 DDX50Q9BQ39 737 aaKnown RBP20.77■□□□□ 0.92
HDAC2-207ENST00000520170 ACE2Q9BYF1 805 aaPredicted RBP20.77■□□□□ 0.92
HDAC2-207ENST00000520170 SERGEFQ9UGK8 458 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 INTS6Q9UL03 887 aaKnown RBP20.77■□□□□ 0.92
HDAC2-207ENST00000520170 SCML1Q9UN30 329 aa20.77■□□□□ 0.92
HDAC2-207ENST00000520170 NYNRINQ9P2P1 1898 aaKnown RBP20.76■□□□□ 0.91
HDAC2-207ENST00000520170 TYW5A2RUC4 315 aaKnown RBP20.76■□□□□ 0.91
HDAC2-207ENST00000520170 MID1O15344 667 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 ASLP04424 464 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 GALCP54803 685 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 RACK1P63244 317 aaKnown RBP20.76■□□□□ 0.91
HDAC2-207ENST00000520170 LRRC63Q05C16 580 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 HNRNPA1L2Q32P51 320 aaKnown RBP20.76■□□□□ 0.91
HDAC2-207ENST00000520170 COBLL1Q53SF7 1204 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 NCEH1Q6PIU2 408 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 DHRS13Q6UX07 377 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 MMS22LQ6ZRQ5 1243 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 MMAAQ8IVH4 418 aaKnown RBP20.76■□□□□ 0.91
HDAC2-207ENST00000520170 CCDC117Q8IWD4 279 aaPredicted RBP20.76■□□□□ 0.91
HDAC2-207ENST00000520170 KAT5Q92993 513 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 FCRL2Q96LA5 508 aaPredicted RBP20.76■□□□□ 0.91
HDAC2-207ENST00000520170 SLC6A18Q96N87 628 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 GSDMAQ96QA5 445 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 NUCKS1Q9H1E3 243 aaKnown RBP20.76■□□□□ 0.91
HDAC2-207ENST00000520170 NEUROG2Q9H2A3 272 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 FTSJ1Q9UET6 329 aa20.76■□□□□ 0.91
HDAC2-207ENST00000520170 BPTFQ12830 3046 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 DOCK9Q9BZ29 2069 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 A0A1W2PP55 124 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 A0A1W2PPC4 97 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 VILLO15195 856 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 FBXO21O94952 628 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 MOCS2O96007 188 aaPredicted RBP20.75■□□□□ 0.91
HDAC2-207ENST00000520170 CTSOP43234 321 aaPredicted RBP20.75■□□□□ 0.91
HDAC2-207ENST00000520170 SFSWAPQ12872 951 aaKnown RBP20.75■□□□□ 0.91
HDAC2-207ENST00000520170 CDH18Q13634 790 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 STILQ15468 1287 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 CST6Q15828 149 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 INAVAQ3KP66 663 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 SOWAHCQ53LP3 525 aaPredicted RBP20.75■□□□□ 0.91
HDAC2-207ENST00000520170 FSCBQ5H9T9 825 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 FMR1NBQ8N0W7 255 aaPredicted RBP20.75■□□□□ 0.91
HDAC2-207ENST00000520170 ADAM32Q8TC27 787 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 DQX1Q8TE96 717 aaKnown RBP20.75■□□□□ 0.91
HDAC2-207ENST00000520170 LRIG1Q96JA1 1093 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 MRGPRX3Q96LB0 322 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 HSFY1Q96LI6 401 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 OMDQ99983 421 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 DKK4Q9UBT3 224 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 ERVW-1Q9UQF0 538 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 IGSF10Q6WRI0 2623 aa20.75■□□□□ 0.91
HDAC2-207ENST00000520170 TTC34A8MYJ7 566 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 DFNA5O60443 496 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 RNASEH2AO75792 299 aaKnown RBP20.74■□□□□ 0.91
HDAC2-207ENST00000520170 SMC2O95347 1197 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 FYNP06241 537 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 CAMK2BQ13554 666 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 MS4A13Q5J8X5 152 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 PITRM1Q5JRX3 1037 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 C9orf64Q5T6V5 341 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 GATAD2AQ86YP4 633 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 SCUBE3Q8IX30 993 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 SMARCE1Q969G3 411 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 FAM149B1Q96BN6 582 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 SERPINB11Q96P15 392 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 EBF2Q9HAK2 575 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 METTL14Q9HCE5 456 aaKnown RBP20.74■□□□□ 0.91
HDAC2-207ENST00000520170 ST7Q9NRC1 585 aa20.74■□□□□ 0.91
HDAC2-207ENST00000520170 AASDHPPTQ9NRN7 309 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms