RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 SND1Q7KZF4 910 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPIDR-212ENST00000519661 METTL3Q86U44 580 aaKnown RBP11.91□□□□□ -0.5
SPIDR-212ENST00000519661 LONP2Q86WA8 852 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 PSTKQ8IV42 348 aaKnown RBP11.91□□□□□ -0.5
SPIDR-212ENST00000519661 NAT16Q8N8M0 369 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 NIPA2Q8N8Q9 360 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 WFDC5Q8TCV5 224 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 ALG14Q96F25 216 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 NCAPGQ9BPX3 1015 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 TKTL2Q9H0I9 626 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 TMEM245Q9H330 911 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 PLK2Q9NYY3 685 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 RAPGEFL1Q9UHV5 662 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 GGA2Q9UJY4 613 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 OR51B4Q9Y5P0 310 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 SCINQ9Y6U3 715 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 ZNF292O60281 2723 aa11.91□□□□□ -0.5
SPIDR-212ENST00000519661 RIF1Q5UIP0 2472 aaKnown RBP11.91□□□□□ -0.5
SPIDR-212ENST00000519661 ANKRD62A6NC57 917 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 SGK1O00141 431 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 APBB3O95704 486 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 ASLP04424 464 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 PLEKP08567 350 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 DLDP09622 509 aaKnown RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 PABPC1P11940 636 aaKnown RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 PCK1P35558 622 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 CDH4P55283 916 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 RNASE9P60153 205 aaKnown RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 OGDHQ02218 1023 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 KDSRQ06136 332 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 NME3Q13232 169 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 PTPRNQ16849 979 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 RAP1GAP2Q684P5 730 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 ALKBH5Q6P6C2 394 aaKnown RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 USP34Q70CQ2 3546 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 SETD3Q86TU7 594 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 CHSY1Q86X52 802 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 MFN1Q8IWA4 741 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 CCAR2Q8N163 923 aaKnown RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 ALLCQ8N6M5 410 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 ZNF513Q8N8E2 541 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 TC2NQ8N9U0 490 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 SUMF1Q8NBK3 374 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 IGSF8Q969P0 613 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 MYO19Q96H55 970 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 SELENOOQ9BVL4 669 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 FBRSQ9HAH7 460 aa11.9□□□□□ -0.5
SPIDR-212ENST00000519661 MRPL47Q9HD33 250 aaKnown RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 INTS6Q9UL03 887 aaKnown RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 ZFHX2Q9C0A1 2572 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-212ENST00000519661 ANTXRLA6NF34 631 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 CCP110O43303 1012 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 TBL1XO60907 577 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 LCA5LO95447 670 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 IGLV3-19P01714 112 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 CDC25BP30305 580 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 L1CAMP32004 1257 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 ZNF75DP51815 510 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 ZNF135P52742 658 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 ATXN1P54253 815 aaKnown RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 CSTF1Q05048 431 aaKnown RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 CAMK2GQ13555 558 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 C15orf59Q2T9L4 293 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 PLEKHG6Q3KR16 790 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 ARL13BQ3SXY8 428 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 C2orf27AQ580R0 203 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 TDRD12Q587J7 1177 aaKnown RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 SH3PXD2AQ5TCZ1 1133 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 EMC10Q5UCC4 262 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 EGFLAMQ63HQ2 1017 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 CYP4V2Q6ZWL3 525 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 NLRP14Q86W24 1093 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 FAM131BQ86XD5 332 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 LGI2Q8N0V4 545 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 ARFGAP1Q8N6T3 406 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 TXNDC5Q8NBS9 432 aaKnown RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 FAM172AQ8WUF8 416 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 UCMAQ8WVF2 138 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 ZC3H10Q96K80 434 aaKnown RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 MCEEQ96PE7 176 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 PPP1R9BQ96SB3 815 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 TRIM5Q9C035 493 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 ABCB8Q9NUT2 735 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 KIAA1522Q9P206 1035 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 CNOT8Q9UFF9 292 aaKnown RBP11.89□□□□□ -0.51
SPIDR-212ENST00000519661 LCMT1Q9UIC8 334 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 INTUQ9ULD6 942 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 SLC8A2Q9UPR5 921 aa11.89□□□□□ -0.51
SPIDR-212ENST00000519661 WASH4PA8MWX3 477 aa11.88□□□□□ -0.51
SPIDR-212ENST00000519661 C10orf142B7Z368 130 aa11.88□□□□□ -0.51
SPIDR-212ENST00000519661 TSPAN3O60637 253 aa11.88□□□□□ -0.51
SPIDR-212ENST00000519661 MTA2O94776 668 aa11.88□□□□□ -0.51
SPIDR-212ENST00000519661 KLF8O95600 359 aaPredicted RBP11.88□□□□□ -0.51
SPIDR-212ENST00000519661 MOCS2O96007 188 aaPredicted RBP11.88□□□□□ -0.51
SPIDR-212ENST00000519661 ATP5BP06576 529 aaKnown RBP11.88□□□□□ -0.51
SPIDR-212ENST00000519661 SRPRAP08240 638 aaKnown RBP11.88□□□□□ -0.51
SPIDR-212ENST00000519661 TPM1P09493 284 aa11.88□□□□□ -0.51
SPIDR-212ENST00000519661 CD70P32970 193 aa11.88□□□□□ -0.51
SPIDR-212ENST00000519661 SULT2A1Q06520 285 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms