RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SPACA7Q96KW9 195 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 MRGPRX3Q96LB0 322 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 MTG2Q9H4K7 406 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 NLRC4Q9NPP4 1024 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 PRSS16Q9NQE7 514 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 ANLNQ9NQW6 1124 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 DDIT4Q9NX09 232 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 KIAA1522Q9P206 1035 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-215ENST00000519474 USP36Q9P275 1121 aaKnown RBP9.67□□□□□ -0.86
HDAC3-215ENST00000519474 SUN2Q9UH99 717 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 TMEM59LQ9UK28 342 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 NOCTQ9UK39 431 aaKnown RBP9.67□□□□□ -0.86
HDAC3-215ENST00000519474 PILRBQ9UKJ0 227 aa9.67□□□□□ -0.86
HDAC3-215ENST00000519474 SYNJ2BP-COX16A0A087WUM0 186 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 C4orf47A7E2U8 309 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 H0Y626 953 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 I6L893 689 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 M0QYT0 321 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 TEX33O43247 280 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 AP5Z1O43299 807 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 LUC7L3O95232 432 aaKnown RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 ADCY5O95622 1261 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 APOEP02649 317 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 SLC2A3P11169 496 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 ATP1A3P13637 1013 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 ABCB4P21439 1286 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 MAOBP27338 520 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 CCR1P32246 355 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 SCNN1AP37088 669 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 CSKP41240 450 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 CTSOP43234 321 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 CXCR3P49682 368 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 TPMTP51580 245 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 NOMO3P69849 1222 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 FMO1Q01740 532 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 MYL5Q02045 173 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 ARID5AQ03989 594 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 UBXN1Q04323 297 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 TYRO3Q06418 890 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 NME3Q13232 169 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 AUHQ13825 339 aaKnown RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 STARD3Q14849 445 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 C5orf22Q49AR2 442 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 FKBP15Q5T1M5 1219 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 OTUD1Q5VV17 481 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 TRNP1Q6NT89 227 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 KIAA1324Q6UXG2 1013 aaKnown RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 SERPINA13PQ6UXR4 307 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 CYP2U1Q7Z449 544 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 ZNF557Q8N988 423 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 OR52K2Q8NGK3 314 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 OR2T3Q8NH03 318 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 EPS8L1Q8TE68 723 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 SLC20A1Q8WUM9 679 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 PRCCQ92733 491 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 RNF34Q969K3 372 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 IGSF8Q969P0 613 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 ALG14Q96F25 216 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 PGAP3Q96FM1 320 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 TOE1Q96GM8 510 aaKnown RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 ERGIC2Q96RQ1 377 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 PCDHB18PQ96TA0 734 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 WDCPQ9H6R7 721 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 COX16Q9P0S2 106 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 EVLQ9UI08 416 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-215ENST00000519474 SLCO3A1Q9UIG8 710 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 CEP83Q9Y592 693 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 NUP205Q92621 2012 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 CFAP54Q96N23 3096 aa9.66□□□□□ -0.86
HDAC3-215ENST00000519474 DRGXA6NNA5 263 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 LGALS16A8MUM7 142 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 METTL12A8MUP2 240 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 NDUFS2O75306 463 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 PAGE1O75459 146 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 DAB1O75553 588 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 ENDOD1O94919 500 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 IGLV3-19P01714 112 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 TPM2P07951 284 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 MZF1P28698 734 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-215ENST00000519474 CD6P30203 668 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 STAT1P42224 750 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 IRAK1P51617 712 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 PLK1P53350 603 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 CDR2Q01850 454 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 SLC20A2Q08357 652 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 FNDC3BQ53EP0 1204 aaKnown RBP9.65□□□□□ -0.86
HDAC3-215ENST00000519474 PITRM1Q5JRX3 1037 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 PEAR1Q5VY43 1037 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-215ENST00000519474 NAA35Q5VZE5 725 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 LYSMD4Q5XG99 296 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 SLC23A3Q6PIS1 610 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 ARCQ7LC44 396 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 BNIPLQ7Z465 357 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 PHLDB2Q86SQ0 1253 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 CHSY1Q86X52 802 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 ZNF677Q86XU0 584 aa9.65□□□□□ -0.86
HDAC3-215ENST00000519474 DHX40Q8IX18 779 aaKnown RBP9.65□□□□□ -0.86
HDAC3-215ENST00000519474 CCAR2Q8N163 923 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms