RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 ARL4CP56559 192 aa24.02■■□□□ 1.44
SLIT3-204ENST00000518140 TRIP4Q15650 581 aaPredicted RBP24.02■■□□□ 1.44
SLIT3-204ENST00000518140 LONRF1Q17RB8 773 aa24.02■■□□□ 1.44
SLIT3-204ENST00000518140 CAPN12Q6ZSI9 719 aa24.02■■□□□ 1.44
SLIT3-204ENST00000518140 PDZD4Q76G19 769 aaPredicted RBP24.02■■□□□ 1.44
SLIT3-204ENST00000518140 C7orf61Q8IZ16 206 aa24.02■■□□□ 1.44
SLIT3-204ENST00000518140 ZNF512Q96ME7 567 aaPredicted RBP24.02■■□□□ 1.44
SLIT3-204ENST00000518140 SPATA13Q96N96 652 aa24.02■■□□□ 1.44
SLIT3-204ENST00000518140 CAPS2Q9BXY5 557 aa24.02■■□□□ 1.44
SLIT3-204ENST00000518140 MRPL17Q9NRX2 175 aaKnown RBP24.02■■□□□ 1.44
SLIT3-204ENST00000518140 PCDHB12Q9Y5F1 795 aa24.02■■□□□ 1.44
SLIT3-204ENST00000518140 ALPK3Q96L96 1907 aa24.02■■□□□ 1.44
SLIT3-204ENST00000518140 NDC80O14777 642 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 HOXC13P31276 330 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 GALNT2Q10471 571 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 ARHGEF18Q6ZSZ5 1173 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 IGDCC3Q8IVU1 814 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 AGGF1Q8N302 714 aaeCLIP24.01■■□□□ 1.43
SLIT3-204ENST00000518140 OLA1Q9NTK5 396 aaKnown RBP24.01■■□□□ 1.43
SLIT3-204ENST00000518140 LCHNA4D1U4 455 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 CORO7P57737 925 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 PPARDQ03181 441 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 BBS9Q3SYG4 887 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 MS4A13Q5J8X5 152 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 ARHGAP36Q6ZRI8 547 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 ZNF683Q8IZ20 524 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 ZNF567Q8N184 647 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 KLHL23Q8NBE8 558 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 TBC1D31Q96DN5 1066 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 C1orf74Q96LT6 269 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 VANGL2Q9ULK5 521 aa24.01■■□□□ 1.43
SLIT3-204ENST00000518140 NOVA2Q9UNW9 492 aaKnown RBP24.01■■□□□ 1.43
SLIT3-204ENST00000518140 ZNF840PA6NDX5 716 aa24■■□□□ 1.43
SLIT3-204ENST00000518140 A6NNZ2 444 aa24■■□□□ 1.43
SLIT3-204ENST00000518140 MAGEA9P43362 315 aa24■■□□□ 1.43
SLIT3-204ENST00000518140 KCNQ1P51787 676 aa24■■□□□ 1.43
SLIT3-204ENST00000518140 TUBB8Q3ZCM7 444 aa24■■□□□ 1.43
SLIT3-204ENST00000518140 ARHGAP12Q8IWW6 846 aa24■■□□□ 1.43
SLIT3-204ENST00000518140 TMEM109Q9BVC6 243 aa24■■□□□ 1.43
SLIT3-204ENST00000518140 ZMYND8Q9ULU4 1186 aaPredicted RBP24■■□□□ 1.43
SLIT3-204ENST00000518140 KIAA1671Q9BY89 1806 aa24■■□□□ 1.43
SLIT3-204ENST00000518140 E7ESA3 106 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 PRRG1O14668 218 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 IGLV3-27P01718 113 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 SLC2A3P11169 496 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 CA8P35219 290 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 PPM1AP35813 382 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 GARSP41250 739 aaKnown RBP23.99■■□□□ 1.43
SLIT3-204ENST00000518140 GRIA1P42261 906 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 MAGEA6P43360 314 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 ALDH1A3P47895 512 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 GPX6P59796 221 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 SKOR1P84550 965 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 PPIDQ08752 370 aaKnown RBP23.99■■□□□ 1.43
SLIT3-204ENST00000518140 TWF1Q12792 350 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 AUHQ13825 339 aaKnown RBP23.99■■□□□ 1.43
SLIT3-204ENST00000518140 CAND1Q86VP6 1230 aaKnown RBP23.99■■□□□ 1.43
SLIT3-204ENST00000518140 CLUHO75153 1309 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 HMGB1P1B2RPK0 211 aaPredicted RBP23.99■■□□□ 1.43
SLIT3-204ENST00000518140 RASGRF2O14827 1237 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 CSPG5O95196 566 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 CNPP09543 421 aaKnown RBP23.99■■□□□ 1.43
SLIT3-204ENST00000518140 IFI35P80217 286 aaPredicted RBP23.99■■□□□ 1.43
SLIT3-204ENST00000518140 CEP128Q6ZU80 1094 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 PDIK1LQ8N165 341 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 MYEOVQ96EZ4 313 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 SERPINB12Q96P63 405 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 ZBP1Q9H171 429 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 HSFX1Q9UBD0 423 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 INSL6Q9Y581 213 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 RAD54BQ9Y620 910 aa23.99■■□□□ 1.43
SLIT3-204ENST00000518140 MYO18AQ92614 2054 aaKnown RBP23.99■■□□□ 1.43
SLIT3-204ENST00000518140 GOLGA6L7A0A1B0GV03 622 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 APOEP02649 317 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 PTPN3P26045 913 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 SERPINB6P35237 376 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 PLD1Q13393 1074 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 AGBL2Q5U5Z8 902 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 FBXO36Q8NEA4 188 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 CLP1Q92989 425 aaKnown RBP23.98■■□□□ 1.43
SLIT3-204ENST00000518140 CEP295NLQ96MC4 621 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 SMAPO00193 183 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 DFFAO00273 331 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 NCAM2O15394 837 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 CNTN5O94779 1100 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 CSH1P0DML2 217 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 CSH2P0DML3 217 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 SSTR1P30872 391 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 NRG1Q02297 640 aaPredicted RBP23.98■■□□□ 1.43
SLIT3-204ENST00000518140 ZBTB17Q13105 803 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 RAP1GAP2Q684P5 730 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 C4orf22Q6V702 233 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 HERC6Q8IVU3 1022 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 PYROXD1Q8WU10 500 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 HDAC11Q96DB2 347 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 BTN2A3PQ96KV6 586 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 SLC39A8Q9C0K1 460 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 CTNNAL1Q9UBT7 734 aa23.98■■□□□ 1.43
SLIT3-204ENST00000518140 EIF3HO15372 352 aaKnown RBP eCLIP23.97■■□□□ 1.43
SLIT3-204ENST00000518140 MX2P20592 715 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms