RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 YY1P25490 414 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 ACRV1P26436 265 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 ICAM3P32942 547 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 RARSP54136 660 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 UBXN1Q04323 297 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 CAMK1Q14012 370 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 COG2Q14746 738 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 MED22Q15528 200 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 PREPLQ4J6C6 727 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 CCDC158Q5M9N0 1113 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 CERCAMQ5T4B2 595 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 LRCH2Q5VUJ6 765 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 SLC9A4Q6AI14 798 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 MTFR2Q6P444 385 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 UBE2Q1Q7Z7E8 422 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 TMPRSS6Q8IU80 811 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 C11orf44Q8N8P7 122 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 ZBTB8BQ8NAP8 495 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 IL17DQ8TAD2 202 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 SUN3Q8TAQ9 357 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 FAM136AQ96C01 138 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 RBM17Q96I25 401 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 BOD1Q96IK1 185 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 C20orf173Q96LM9 149 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 HIST1H2AAQ96QV6 131 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 RANBP17Q9H2T7 1088 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 CNOT7Q9UIV1 285 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 SLC27A6Q9Y2P4 619 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 TRIM64CA6NLI5 447 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 EFCAB8A8MWE9 144 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 VWC2LB2RUY7 222 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 PEX12O00623 359 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 HNRNPRO43390 633 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 LPXNO60711 386 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 SPDEFO95238 335 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 VIPP01282 170 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 RHOP08100 348 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 QDPRP09417 244 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 IFNAR1P17181 557 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 ATF7P17544 494 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 NFKBIAP25963 317 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 PSMB10P40306 273 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 CD86P42081 329 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 MCM2P49736 904 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 GATMP50440 423 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 RAD23AP54725 363 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 RBP5P82980 135 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 DDR1Q08345 913 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 BFSP1Q12934 665 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 MTAPQ13126 283 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 CCNIQ14094 377 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 PTPN14Q15678 1187 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 ADIPOQQ15848 244 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 SP5Q6BEB4 398 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 DGAT2L7PQ6IED9 249 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 ALKBH5Q6P6C2 394 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 CLEC9AQ6UXN8 241 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 MAVSQ7Z434 540 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 CPEB3Q8NE35 698 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 GPR150Q8NGU9 434 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 MBD3L2Q8NHZ7 208 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 HMGB4Q8WW32 186 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 HERC2P3Q9BVR0 1158 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 ACTRT3Q9BYD9 372 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 ANKRD2Q9GZV1 360 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 MORF4L1Q9UBU8 362 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 MAFFQ9ULX9 164 aa6.1□□□□□ -1.43
CTNNA1-202ENST00000517533 COL15A1P39059 1388 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 RNASET2O00584 256 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 TNFSF14O43557 240 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 HMMRO75330 724 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 ENTPD3O75355 529 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 B3GALNT1O75752 331 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 CER1O95813 267 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 THEGLP0DJG4 465 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 RARGP13631 454 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 C6P13671 934 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 HOXA5P20719 270 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 TLX1P31314 330 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 THPOP40225 353 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 ZNF41P51814 821 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 C17orf67Q0P5P2 114 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 TFCP2Q12800 502 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 IRF3Q14653 427 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 E2F5Q15329 346 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 TTC31Q49AM3 519 aaPredicted RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 GARNL3Q5VVW2 1013 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 LIPMQ5VYY2 423 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 NAA35Q5VZE5 725 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 MSANTD2Q6P1R3 559 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 CPLX2Q6PUV4 134 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 UNC5DQ6UXZ4 953 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 RAPH1Q70E73 1250 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 ULK2Q8IYT8 1036 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 IZUMO1Q8IYV9 350 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 FRMD1Q8N878 549 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 FAM71DQ8N9W8 422 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 LSM14AQ8ND56 463 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 MOSPD2Q8NHP6 518 aa6.09□□□□□ -1.43
CTNNA1-202ENST00000517533 SCFD2Q8WU76 684 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms