RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 DSG4Q86SJ6 1040 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 DDX53Q86TM3 631 aaKnown RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 SLC9B2Q86UD5 537 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 NFE4Q86UQ8 179 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 DHX37Q8IY37 1157 aaKnown RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 DSELQ8IZU8 1212 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 ABRAQ8N0Z2 381 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 PGBD5Q8N414 524 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF610Q8N9Z0 462 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 TMEM87AQ8NBN3 555 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 OSCP1Q8WVF1 389 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 CELF1Q92879 486 aaKnown RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 SOSTQ9BQB4 213 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 HTATIP2Q9BUP3 242 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 TTYH3Q9C0H2 523 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 CATSPERBQ9H7T0 1116 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 NTN4Q9HB63 628 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 TRIM39Q9HCM9 518 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 CABP5Q9NP86 173 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 KCNMB3Q9NPA1 279 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 SNX15Q9NRS6 342 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 AGO1Q9UL18 857 aaKnown RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 PRAG1Q86YV5 1406 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 LRCOL1A6NCL2 159 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 A6NNZ2 444 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 MS4A18H0YCH9 400 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 RHODO00212 210 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 PSMD14O00487 310 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 KCNQ2O43526 872 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 PRKD3O94806 890 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 MOCS3O95396 460 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 CHEK2O96017 543 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF853P0CG23 659 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 CD99P14209 185 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 CREB1P16220 341 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 TYK2P29597 1187 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 FLT3P36888 993 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 HUNKP57058 714 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 LOXL3P58215 753 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 DEUP1Q05D60 604 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZFP36L1Q07352 338 aaKnown RBP-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 MGAT2Q10469 447 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 TARDBPQ13148 414 aaKnown RBP eCLIP-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 TPRNQ4KMQ1 711 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 MUM1L1Q5H9M0 696 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZC3H12BQ5HYM0 836 aaKnown RBP-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 SLC35E4Q6ICL7 350 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF530Q6P9A1 599 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 AOPEPQ8N6M6 819 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 EFHBQ8N7U6 833 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 PCSK9Q8NBP7 692 aaKnown RBP-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 KLHDC9Q8NEP7 349 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 SLC24A4Q8NFF2 622 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 ST13P5Q8NFI4 369 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 DMBX1Q8NFW5 382 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 IFI44Q8TCB0 444 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 FATE1Q969F0 183 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 FAM104AQ969W3 186 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 WDYHV1Q96HA8 205 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 TINF2Q9BSI4 451 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 C17orf80Q9BSJ5 609 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 GTSE1Q9NYZ3 720 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 THEGQ9P2T0 379 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 PRKAG3Q9UGI9 489 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 PHTF1Q9UMS5 762 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 SPATA31A1Q5TZJ5 1347 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 NID2Q14112 1375 aa-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 KIF26AQ9ULI4 1882 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-542P-201ENST00000516405 NPC1O15118 1278 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 PRAMEF2O60811 474 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 SERPINI2O75830 405 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZFAND5O76080 213 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 PMS2P2O95744 297 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 MBPP02686 304 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 APPP05067 770 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 GJB1P08034 283 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 COL1A2P08123 1366 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 PRSS56P0CW18 603 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 CYP2C9P11712 490 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 CHRNB2P17787 502 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 CIITAP33076 1130 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 MCM5P33992 734 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 PHKA1P46020 1223 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 LINC00315P59091 139 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 KRTAP10-4P60372 401 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 TNFAIP2Q03169 654 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 ITGA9Q13797 1035 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 MLC1Q15049 377 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 SF3A2Q15428 464 aaKnown RBP-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 TERF2Q15554 542 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 FAM189A2Q15884 450 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 SYT16Q17RD7 645 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF284Q2VY69 593 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 CCDC93Q567U6 631 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 DENND2CQ68D51 928 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 RALGAPA1Q6GYQ0 2036 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 FRMD7Q6ZUT3 714 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 RUSC2Q8N2Y8 1516 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 C11orf42Q8N5U0 333 aa-0.51□□□□□ -2.49
RNU6-542P-201ENST00000516405 AGAP3Q96P47 875 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms