RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 GOLGA8SH3BPF8 625 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 SPINT1O43278 529 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 LSM8O95777 96 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 LATS1O95835 1130 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 FLT3P36888 993 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 PBX1P40424 430 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 WASP42768 502 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 TNFRSF4P43489 277 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 ATXN1P54253 815 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 MRPS21P82921 87 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 PTP4A2Q12974 167 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 CLN3Q13286 438 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 CRY1Q16526 586 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 FILIP1LQ4L180 1135 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 FAM102AQ5T9C2 384 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 PIK3R6Q5UE93 754 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 NUGGCQ68CJ6 796 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 TMEM215Q68D42 235 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 MMS22LQ6ZRQ5 1243 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 IRF2BP2Q7Z5L9 587 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 LONP2Q86WA8 852 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 UNC45BQ8IWX7 931 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 SUMF1Q8NBK3 374 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 TPCN2Q8NHX9 752 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 ATRIPQ8WXE1 791 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 C11orf70Q9BRQ4 267 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 FAM204AQ9H8W3 233 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 ANLNQ9NQW6 1124 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 DDIT4Q9NX09 232 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 MMP17Q9ULZ9 603 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 STARD13Q9Y3M8 1113 aa11.43□□□□□ -0.58
UBE2D3-232ENST00000514755 VPS13AQ96RL7 3174 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 KCNU1A8MYU2 1149 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 TMEM229AB2RXF0 380 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 WASH3PC4AMC7 463 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 I6L893 689 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 LCE2BO14633 110 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 TBL1XO60907 577 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 CYBBP04839 570 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 MMP8P22894 467 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 HLA-FP30511 346 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 NOS2P35228 1153 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 MATKP42679 507 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 SLC11A2P49281 568 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 GDF10P55107 478 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 UBASH3AP57075 661 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 RPS24P62847 133 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 CDK17Q00537 523 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 NME3Q13232 169 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 PPP2R5DQ14738 602 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 LPAL2Q16609 132 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 MPPE1Q53F39 396 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 RAB6CQ53S08 254 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 MS4A13Q5J8X5 152 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 RAP1GAP2Q684P5 730 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 ZC3H14Q6PJT7 736 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 DNAAF5Q86Y56 855 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 ZDHHC17Q8IUH5 632 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 ANKMY2Q8IV38 441 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 CFAP52Q8N1V2 620 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 EMC1Q8N766 993 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 SORCS1Q8WY21 1168 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 AZIN2Q96A70 460 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 ACDQ96AP0 544 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 TMA16Q96EY4 203 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 NPY6RQ99463 290 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 AGPAT1Q99943 283 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 SYT11Q9BT88 431 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 TRIM62Q9BVG3 475 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 FAM126AQ9BYI3 521 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 RAB6CQ9H0N0 254 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 METTL5Q9NRN9 209 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 STIM2Q9P246 746 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 TMEM59LQ9UK28 342 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 SLC27A6Q9Y2P4 619 aa11.42□□□□□ -0.58
UBE2D3-232ENST00000514755 GOLGA6L19H0YKK7 550 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 M0QYT0 321 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 IL2RAP01589 272 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 LMNAP02545 664 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 APOEP02649 317 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 TACR2P21452 398 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 HOXA6P31267 233 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 CD70P32970 193 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 SULT1E1P49888 294 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 NRLP54845 237 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 SNX16P57768 344 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 CENPCQ03188 943 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 CLEC16AQ2KHT3 1053 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 RNF43Q68DV7 783 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 ANO7Q6IWH7 933 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 KIAA1211LQ6NV74 962 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 LRSAM1Q6UWE0 723 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 WDR5BQ86VZ2 330 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 DCLK2Q8N568 766 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 CAMKK1Q8N5S9 505 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 RNF214Q8ND24 703 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 MDGA1Q8NFP4 955 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 JOSD2Q8TAC2 188 aa11.41□□□□□ -0.58
UBE2D3-232ENST00000514755 NT5C3BQ969T7 300 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms