RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 KCNG4Q8TDN1 519 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 XAGE5Q8WWM1 108 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 SH3KBP1Q96B97 665 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 EDC3Q96F86 508 aaKnown RBP5.64□□□□□ -1.51
RFC1-216ENST00000514572 SNX18Q96RF0 628 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 LBHD1Q9BQE6 289 aaPredicted RBP5.64□□□□□ -1.51
RFC1-216ENST00000514572 THAP7Q9BT49 309 aaPredicted RBP5.64□□□□□ -1.51
RFC1-216ENST00000514572 ELOVL1Q9BW60 279 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 ABHD10Q9NUJ1 306 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 THAP1Q9NVV9 213 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 SEMA5BQ9P283 1151 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 HDAC6Q9UBN7 1215 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 SARDHQ9UL12 918 aa5.64□□□□□ -1.51
RFC1-216ENST00000514572 DNMBPQ6XZF7 1577 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 UNC119BA6NIH7 251 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 C17orf100A8MU93 164 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 TIPRLO75663 272 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 NXPH3O95157 252 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 HSPA1AP0DMV8 641 aaKnown RBP5.63□□□□□ -1.51
RFC1-216ENST00000514572 HSPA1BP0DMV9 641 aaKnown RBP5.63□□□□□ -1.51
RFC1-216ENST00000514572 DUSP1P28562 367 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 GALNSP34059 522 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 TPTEP56180 551 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 TXNL4AP83876 142 aaKnown RBP5.63□□□□□ -1.51
RFC1-216ENST00000514572 TDGQ13569 410 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 TXNRD1Q16881 649 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 MTHFD1LQ6UB35 978 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 ATF7IPQ6VMQ6 1270 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 USP51Q70EK9 711 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 RHOUQ7L0Q8 258 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 MON1AQ86VX9 555 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 ARHGEF19Q8IW93 802 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 LAS2Q8IYD9 372 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 EXD3Q8N9H8 876 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 RUFY2Q8WXA3 655 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 PTCD3Q96EY7 689 aaKnown RBP5.63□□□□□ -1.51
RFC1-216ENST00000514572 LOXL4Q96JB6 756 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 TEPSINQ96N21 525 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 TOX2Q96NM4 488 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 ADOQ96SZ5 270 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 CINPQ9BW66 212 aaPredicted RBP5.63□□□□□ -1.51
RFC1-216ENST00000514572 RNF26Q9BY78 433 aaPredicted RBP5.63□□□□□ -1.51
RFC1-216ENST00000514572 CTDSP1Q9GZU7 261 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 KCTD5Q9NXV2 234 aa5.63□□□□□ -1.51
RFC1-216ENST00000514572 TEX22C9J3V5 150 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 TSPAN4O14817 238 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 EGR2P11161 476 aaPredicted RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 PORP16435 677 aaPredicted RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 ZNF37AP17032 561 aaPredicted RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 SFPQP23246 707 aaKnown RBP eCLIP5.62□□□□□ -1.51
RFC1-216ENST00000514572 PRPH2P23942 346 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 PRKCHP24723 683 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 ICAM3P32942 547 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 ARL1P40616 181 aaPredicted RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 HARS2P49590 506 aaKnown RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 SELENOPP49908 381 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 RPS3AP61247 264 aaKnown RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 MPP3Q13368 585 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 BMPR2Q13873 1038 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 HS1BP3Q53T59 392 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 FAM133BQ5BKY9 247 aaKnown RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 UBAP2Q5T6F2 1119 aaKnown RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 TMEM88Q6PEY1 159 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 KYAT3Q6YP21 454 aaKnown RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 CPLX4Q7Z7G2 160 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 ADGRG6Q86SQ4 1221 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 SCN4BQ8IWT1 228 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 RPAP2Q8IXW5 612 aaPredicted RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 ZNF276Q8N554 614 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 SIRT6Q8N6T7 355 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 ENDOVQ8N8Q3 282 aaKnown RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 ASB10Q8WXI3 467 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 USP6NLQ92738 828 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 CD180Q99467 661 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 EYA3Q99504 573 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.62□□□□□ -1.51
RFC1-216ENST00000514572 PDCL3Q9H2J4 239 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 TBCCD1Q9NVR7 557 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 HAUS2Q9NVX0 235 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 GAR1Q9NY12 217 aaKnown RBP5.62□□□□□ -1.51
RFC1-216ENST00000514572 KCND2Q9NZV8 630 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 MGAT4CQ9UBM8 478 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 AMFRQ9UKV5 643 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 SUFUQ9UMX1 484 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 OSGIN2Q9Y236 505 aa5.62□□□□□ -1.51
RFC1-216ENST00000514572 CENPVL1A0A0U1RR11 272 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 GTPBP1O00178 669 aaKnown RBP5.61□□□□□ -1.51
RFC1-216ENST00000514572 AP4M1O00189 453 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 LDLRAD4O15165 306 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 YY2O15391 372 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 MPPED1O15442 326 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 AQRO60306 1485 aaKnown RBP eCLIP5.61□□□□□ -1.51
RFC1-216ENST00000514572 PGM3O95394 542 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 URODP06132 367 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 DLDP09622 509 aaKnown RBP5.61□□□□□ -1.51
RFC1-216ENST00000514572 ZFXP17010 805 aaPredicted RBP5.61□□□□□ -1.51
RFC1-216ENST00000514572 BMP7P18075 431 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 LAG3P18627 525 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 CXCR5P32302 372 aa5.61□□□□□ -1.51
RFC1-216ENST00000514572 BSGP35613 385 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms