RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	RPP40	O75818	363 aa	Known RBP	4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	NDUFB8	O95169	186 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	KAT7	O95251	611 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	LCK	P06239	509 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	IFIT2	P09913	472 aa	Known RBP	4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	GRK5	P34947	590 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	TAS2R50	P59544	299 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	RPL15	P61313	204 aa	Known RBP	4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	PTK2B	Q14289	1009 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	SMTNL2	Q2TAL5	461 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	ZNF569	Q5MCW4	686 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	TTC39A	Q5SRH9	613 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	ANKRD40	Q6AI12	368 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	ERAP2	Q6P179	960 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	EXD3	Q8N9H8	876 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	SLC25A28	Q96A46	364 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	MSI2	Q96DH6	328 aa	Known RBP	4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	MARK4	Q96L34	752 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	ZNF347	Q96SE7	839 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	TXNRD2	Q9NNW7	524 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	LAMP3	Q9UQV4	416 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	CACNA1I	Q9P0X4	2223 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	LMTK3	Q96Q04	1460 aa		4.69	□□□□□ -1.66
MATR3-223	ENST00000514402	GAGE12J	A6NER3	117 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	EFCAB8	A8MWE9	144 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	WNT1	P04628	370 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	POLD2	P49005	469 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	THBS3	P49746	956 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	PGGT1B	P53609	377 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	FOXL2	P58012	376 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	SPARCL1	Q14515	664 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	TBRG1	Q3YBR2	411 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	C6orf10	Q5SRN2	563 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	TTLL5	Q6EMB2	1281 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	TOGARAM2	Q6ZUX3	1019 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	CYB5R4	Q7L1T6	521 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	BHLHA9	Q7RTU4	235 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	ATP2A3	Q93084	1043 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	NPAS1	Q99742	590 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	KRTAP1-5	Q9BYS1	174 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	CCDC134	Q9H6E4	229 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	COG5	Q9UP83	839 aa		4.68	□□□□□ -1.66
MATR3-223	ENST00000514402	TMEM272	A0A1B0GTI8	110 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	KCNJ18	B7U540	433 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	RHOD	O00212	210 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	DNPH1	O43598	174 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	ASNA1	O43681	348 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	IFNA2	P01563	188 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	ALDOC	P09972	364 aa	Known RBP	4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	KLRK1	P26718	216 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	AKT1	P31749	480 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	CIITA	P33076	1130 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	STAT1	P42224	750 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	HTR3A	P46098	478 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	KCNJ4	P48050	445 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	HDAC1	Q13547	482 aa	Predicted RBP	4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	PRTG	Q2VWP7	1150 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	MAP9	Q49MG5	647 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	C10orf76	Q5T2E6	689 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	PGBD2	Q6P3X8	592 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	B4GALNT4	Q76KP1	1039 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	ZNF527	Q8NB42	609 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	LPAR1	Q92633	364 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	MCRS1	Q96EZ8	462 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	CHST12	Q9NRB3	414 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	LIN7C	Q9NUP9	197 aa	Known RBP	4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	ANAPC4	Q9UJX5	808 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	UTS2R	Q9UKP6	389 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	SLC12A4	Q9UP95	1085 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	CNTN6	Q9UQ52	1028 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	TNFSF13B	Q9Y275	285 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	LRCH1	Q9Y2L9	728 aa		4.67	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3D	A0A087WVF3	549 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3I	A0A087WXS9	549 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3E	A0A087X179	549 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3K	A0A087X1G2	549 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3B	A6NDS4	549 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	SLC38A8	A6NNN8	435 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	FOXO6	A8MYZ6	492 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3L	B9A6J9	549 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	MCIDAS	D6RGH6	385 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402		M0QYT0	321 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	SYT5	O00445	386 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	MDM4	O15151	490 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	SKAP2	O75563	359 aa	Predicted RBP	4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	NFATC1	O95644	943 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	KLKB1	P03952	638 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	ITGA2B	P08514	1039 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TBC1D3H	P0C7X1	549 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	SETSIP	P0DME0	302 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TKT	P29401	623 aa	Known RBP	4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	CCKAR	P32238	428 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	ADPRH	P54922	357 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	SHC2	P98077	582 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	TNFAIP2	Q03169	654 aa		4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.66	□□□□□ -1.66
MATR3-223	ENST00000514402	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.66	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms