RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FGF10O15520 208 aaPredicted RBP15.36■□□□□ 0.05
VCAN-211ENST00000513984 HAPLN1P10915 354 aaPredicted RBP15.36■□□□□ 0.05
VCAN-211ENST00000513984 PTPN3P26045 913 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 YWHAQP27348 245 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 STX2P32856 288 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 ARPP19P56211 112 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 ZNF33AQ06730 810 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 TAS1R1Q7RTX1 841 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 DPF3Q92784 378 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 VWCEQ96DN2 955 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 SLC39A13Q96H72 371 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 SIGLEC10Q96LC7 697 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 CRISPLD1Q9H336 500 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 CLIC5Q9NZA1 410 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 SEPT10Q9P0V9 454 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 C1QAP02745 245 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 PSMB4P28070 264 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 PSEN1P49768 467 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 IKBKEQ14164 716 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 PKN2Q16513 984 aaKnown RBP15.36■□□□□ 0.05
VCAN-211ENST00000513984 RNF168Q8IYW5 571 aaPredicted RBP15.36■□□□□ 0.05
VCAN-211ENST00000513984 ZNF473Q8WTR7 871 aaKnown RBP15.36■□□□□ 0.05
VCAN-211ENST00000513984 DCAKDQ8WVC6 231 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 FBXO32Q969P5 355 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 TBC1D31Q96DN5 1066 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 FCRL2Q96LA5 508 aaPredicted RBP15.36■□□□□ 0.05
VCAN-211ENST00000513984 SIK2Q9H0K1 926 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 CWH43Q9H720 699 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 PLAC1Q9HBJ0 212 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 ZC3H7BQ9UGR2 993 aaKnown RBP15.36■□□□□ 0.05
VCAN-211ENST00000513984 NUDT5Q9UKK9 219 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 TTLL3Q9Y4R7 772 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 KIAA1671Q9BY89 1806 aa15.36■□□□□ 0.05
VCAN-211ENST00000513984 KCNK1O00180 336 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 SOAT2O75908 522 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 CPP00450 1065 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 SLC2A3P11169 496 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 RFC2P35250 354 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 CCT5P48643 541 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 ALDH7A1P49419 539 aaKnown RBP15.35■□□□□ 0.05
VCAN-211ENST00000513984 MGAT5BQ3V5L5 792 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 LRRC8BQ6P9F7 803 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 DIS3LQ8TF46 1054 aaKnown RBP15.35■□□□□ 0.05
VCAN-211ENST00000513984 CFAP36Q96G28 342 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 C1orf74Q96LT6 269 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 ZNF317Q96PQ6 595 aaPredicted RBP15.35■□□□□ 0.05
VCAN-211ENST00000513984 VAT1Q99536 393 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 SEPT5Q99719 369 aaPredicted RBP15.35■□□□□ 0.05
VCAN-211ENST00000513984 EBNA1BP2Q99848 306 aaKnown RBP15.35■□□□□ 0.05
VCAN-211ENST00000513984 CEP41Q9BYV8 373 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 CATSPERBQ9H7T0 1116 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 OLA1Q9NTK5 396 aaKnown RBP15.35■□□□□ 0.05
VCAN-211ENST00000513984 MTRRQ9UBK8 725 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 SLC27A5Q9Y2P5 690 aa15.35■□□□□ 0.05
VCAN-211ENST00000513984 TRDMT1O14717 391 aaKnown RBP15.34■□□□□ 0.05
VCAN-211ENST00000513984 PRPF4O43172 522 aaKnown RBP eCLIP15.34■□□□□ 0.05
VCAN-211ENST00000513984 UPP2O95045 317 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 SRGAP2BP0DMP2 458 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 KRT15P19012 456 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 PRKCHP24723 683 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 GRIA1P42261 906 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 MSH2P43246 934 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 SLC18A1P54219 525 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 COG7P83436 770 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 MPP2Q14168 576 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 KBTBD12Q3ZCT8 623 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 SLC8B1Q6J4K2 584 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 RWDD4Q6NW29 188 aaKnown RBP15.34■□□□□ 0.05
VCAN-211ENST00000513984 PRSS55Q6UWB4 352 aaPredicted RBP15.34■□□□□ 0.05
VCAN-211ENST00000513984 PID1Q7Z2X4 250 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 LZTR1Q8N653 840 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 PDCD7Q8N8D1 485 aaKnown RBP15.34■□□□□ 0.05
VCAN-211ENST00000513984 GPR152Q8TDT2 470 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 MZB1Q8WU39 189 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 SLC44A1Q8WWI5 657 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 CHMP6Q96FZ7 201 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 ZNF333Q96JL9 665 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 PRMT1Q99873 361 aaKnown RBP15.34■□□□□ 0.05
VCAN-211ENST00000513984 TRABDQ9H4I3 376 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 KCNK9Q9NPC2 374 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 TLR8Q9NR97 1041 aaKnown RBP15.34■□□□□ 0.05
VCAN-211ENST00000513984 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.34■□□□□ 0.05
VCAN-211ENST00000513984 WBP1LQ9NX94 342 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 KLHL8Q9P2G9 620 aaPredicted RBP15.34■□□□□ 0.05
VCAN-211ENST00000513984 TRHDEQ9UKU6 1024 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 HS3ST4Q9Y661 456 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 PTPRSQ13332 1948 aa15.34■□□□□ 0.05
VCAN-211ENST00000513984 TBX4P57082 545 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 RPL10AP62906 217 aaKnown RBP15.33■□□□□ 0.05
VCAN-211ENST00000513984 DUSP4Q13115 394 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 USP41Q3LFD5 358 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 TEX44Q53QW1 395 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 UNC5AQ6ZN44 842 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 ARHGAP12Q8IWW6 846 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 FBXO22Q8NEZ5 403 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 ZSCAN18Q8TBC5 510 aaPredicted RBP15.33■□□□□ 0.05
VCAN-211ENST00000513984 DEPDC1BQ8WUY9 529 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 MRRFQ96E11 262 aaKnown RBP15.33■□□□□ 0.05
VCAN-211ENST00000513984 IGSF21Q96ID5 467 aa15.33■□□□□ 0.05
VCAN-211ENST00000513984 CEP295NLQ96MC4 621 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms