RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 C16orf52Q8NHV5 167 aa6□□□□□ -1.45
CHD1-209ENST00000512844 GOLGA1Q92805 767 aa6□□□□□ -1.45
CHD1-209ENST00000512844 PIGSQ96S52 555 aa6□□□□□ -1.45
CHD1-209ENST00000512844 SORBS1Q9BX66 1292 aaKnown RBP6□□□□□ -1.45
CHD1-209ENST00000512844 TAF1DQ9H5J8 278 aaPredicted RBP6□□□□□ -1.45
CHD1-209ENST00000512844 MTMR4Q9NYA4 1195 aa6□□□□□ -1.45
CHD1-209ENST00000512844 SLC25A13Q9UJS0 675 aa6□□□□□ -1.45
CHD1-209ENST00000512844 TNFSF13BQ9Y275 285 aa6□□□□□ -1.45
CHD1-209ENST00000512844 COPG1Q9Y678 874 aaKnown RBP6□□□□□ -1.45
CHD1-209ENST00000512844 ZMYM2Q9UBW7 1377 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 AGAP5A6NIR3 686 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 PPEF2O14830 753 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 PRPF4O43172 522 aaKnown RBP eCLIP5.99□□□□□ -1.45
CHD1-209ENST00000512844 TMEM191BP0C7N4 346 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 RFPL3SP0C7P2 107 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 CYP19A1P11511 503 aaPredicted RBP5.99□□□□□ -1.45
CHD1-209ENST00000512844 PEPDP12955 493 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 SOX2P48431 317 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 CDK7P50613 346 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 SHC2P98077 582 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 C10orf76Q5T2E6 689 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 C10orf25Q5T742 122 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 ANKRD45Q5TZF3 282 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 ANO1Q5XXA6 986 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 ERAP2Q6P179 960 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 DEF8Q6ZN54 512 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 RRAGAQ7L523 313 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 SPATA5Q8NB90 893 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 SCAMP5Q8TAC9 235 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 ZNF778Q96MU6 729 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 OSBPL5Q9H0X9 879 aaPredicted RBP5.99□□□□□ -1.45
CHD1-209ENST00000512844 MYLK2Q9H1R3 596 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 MOV10Q9HCE1 1003 aaKnown RBP5.99□□□□□ -1.45
CHD1-209ENST00000512844 PDE11AQ9HCR9 933 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.99□□□□□ -1.45
CHD1-209ENST00000512844 GRHPRQ9UBQ7 328 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 PCDHA10Q9Y5I2 948 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 ZNF521Q96K83 1311 aa5.99□□□□□ -1.45
CHD1-209ENST00000512844 CYP3A7-CYP3A51PA0A087WV96 503 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 SEPT4O43236 478 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 HNRNPRO43390 633 aaKnown RBP5.98□□□□□ -1.45
CHD1-209ENST00000512844 TLR2O60603 784 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 TOP3BO95985 862 aaKnown RBP5.98□□□□□ -1.45
CHD1-209ENST00000512844 CYP3A7P24462 503 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 HOXD9P28356 352 aaPredicted RBP5.98□□□□□ -1.45
CHD1-209ENST00000512844 GRK6P43250 576 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 OAZ1P54368 228 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 GALNT3Q14435 633 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 RBMS2Q15434 407 aaKnown RBP5.98□□□□□ -1.45
CHD1-209ENST00000512844 ADCK5Q3MIX3 580 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 FAM83BQ5T0W9 1011 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 TANGO2Q6ICL3 276 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 DGAT2L7PQ6IED9 249 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 LIN54Q6MZP7 749 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 SYNE3Q6ZMZ3 975 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 GALNT15Q8N3T1 639 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 FSIP1Q8NA03 581 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 OR1N1Q8NGS0 311 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 OR6Y1Q8NGX8 325 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 OTUD7AQ8TE49 926 aaPredicted RBP5.98□□□□□ -1.45
CHD1-209ENST00000512844 HMCESQ96FZ2 354 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 TMEM79Q9BSE2 394 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 FAM167BQ9BTA0 163 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 TRMOQ9BU70 441 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 C1QTNF7Q9BXJ2 289 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 MLXIPQ9HAP2 919 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 ELOVL5Q9NYP7 299 aa5.98□□□□□ -1.45
CHD1-209ENST00000512844 SOCS2O14508 198 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 IRAK2O43187 625 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 ZC3H11AO75152 810 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD1-209ENST00000512844 KAT7O95251 611 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 IGFBP2P18065 325 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 STAT1P42224 750 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 AARSP49588 968 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD1-209ENST00000512844 MCM2P49736 904 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 FOXL2P58012 376 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 FAM3BP58499 235 aaPredicted RBP5.97□□□□□ -1.45
CHD1-209ENST00000512844 DLGAP5Q15398 846 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 GALNTL6Q49A17 601 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 TTC22Q5TAA0 569 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 ISM2Q6H9L7 571 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 ZNF474Q6S9Z5 364 aaPredicted RBP5.97□□□□□ -1.45
CHD1-209ENST00000512844 ANKS1BQ7Z6G8 1248 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.97□□□□□ -1.45
CHD1-209ENST00000512844 ADGRF3Q8IZF5 1079 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 ENDOVQ8N8Q3 282 aaKnown RBP5.97□□□□□ -1.45
CHD1-209ENST00000512844 OR52N4Q8NGI2 321 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 STT3BQ8TCJ2 826 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 COQ8BQ96D53 544 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 ADAD1Q96M93 576 aaKnown RBP5.97□□□□□ -1.45
CHD1-209ENST00000512844 PSMD1Q99460 953 aa5.97□□□□□ -1.45
CHD1-209ENST00000512844 LMTK3Q96Q04 1460 aa5.96□□□□□ -1.45
CHD1-209ENST00000512844 H0Y3Z8 333 aa5.96□□□□□ -1.46
CHD1-209ENST00000512844 MSI1O43347 362 aaKnown RBP5.96□□□□□ -1.46
CHD1-209ENST00000512844 CCNT1O60563 726 aaKnown RBP5.96□□□□□ -1.46
CHD1-209ENST00000512844 MOSPD3O75425 235 aa5.96□□□□□ -1.46
CHD1-209ENST00000512844 KRT38O76015 456 aa5.96□□□□□ -1.46
CHD1-209ENST00000512844 BMP15O95972 392 aa5.96□□□□□ -1.46
CHD1-209ENST00000512844 ME1P48163 572 aa5.96□□□□□ -1.46
CHD1-209ENST00000512844 RBM5P52756 815 aaKnown RBP eCLIP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms