RNA–Protein interactions for RNA: ENST00000512820.5

LIMCH1-216, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-216ENST00000512820 RGS2P41220 211 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 PRKAA2P54646 552 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 KCNK10P57789 538 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 C1orf220Q5T0J3 134 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 SLC4A11Q8NBS3 891 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 URGCPQ8TCY9 931 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 DIS3LQ8TF46 1054 aaKnown RBP8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 DCAKDQ8WVC6 231 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 CRYGNQ8WXF5 182 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 TUBGCP3Q96CW5 907 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 DMAP1Q9NPF5 467 aaPredicted RBP8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 PLA2G4CQ9UP65 541 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 COMMD3-BMI1R4GMX3 469 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 B4GALT4O60513 344 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 TBX10O75333 385 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 VAPBO95292 243 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 ACAT1P24752 427 aaKnown RBP8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 NRLP54845 237 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 GAD2Q05329 585 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 IMPG1Q17R60 797 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 CMC1Q7Z7K0 106 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 NT5DC4Q86YG4 428 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 SPATA2LQ8IUW3 424 aaPredicted RBP8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 RELL1Q8IUW5 271 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 NETO2Q8NC67 525 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 ELOVL4Q9GZR5 314 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 TRPC7Q9HCX4 862 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 RNF19AQ9NV58 838 aa8.6□□□□□ -1.03
LIMCH1-216ENST00000512820 SPDYE5A6NIY4 337 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 RBP1P09455 135 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 UQCRBP14927 111 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 AKAP5P24588 427 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 ARHGDIAP52565 204 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 FOLH1Q04609 750 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 C6orf10Q5SRN2 563 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 CWF19L1Q69YN2 538 aaKnown RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 ANO7Q6IWH7 933 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 CYP2R1Q6VVX0 501 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 LPCAT2Q7L5N7 544 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 FAM228AQ86W67 206 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PSTKQ8IV42 348 aaKnown RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SHCBP1Q8NEM2 672 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 CDC26Q8NHZ8 85 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 ULK4Q96C45 1275 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PHF21BQ96EK2 531 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SDCBP2Q9H190 292 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SEMA6AQ9H2E6 1030 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PRDM12Q9H4Q4 367 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SNX15Q9NRS6 342 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SLC38A7Q9NVC3 462 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 ANKRD6Q9Y2G4 727 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 RGSL1A5PLK6 1076 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SAC3D1A6NKF1 404 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 H3BRB1 525 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 FBXO21O94952 628 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 IL1R2P27930 398 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PTPN7P35236 360 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PPARGP37231 505 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 CD151P48509 253 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 GBE1Q04446 702 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 KLF1Q13351 362 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PRKD1Q15139 912 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 AASDHQ4L235 1098 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 MSS51Q4VC12 460 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 HPS6Q86YV9 775 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PCDH20Q8N6Y1 951 aaKnown RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 MARK4Q96L34 752 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 TUT1Q9H6E5 874 aaKnown RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SYBUQ9NX95 663 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 ADAM28Q9UKQ2 775 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 TRHDEQ9UKU6 1024 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SMIM31A0A1B0GVY4 71 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 EME2A4GXA9 379 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 TTC36A6NLP5 189 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 NR5A2O00482 541 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 CILPO75339 1184 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 RPL5P46777 297 aaKnown RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PPIDQ08752 370 aaKnown RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 FASTKQ14296 549 aaKnown RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 PPP1R26Q5T8A7 1209 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SCARA3Q6AZY7 606 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 TAS2R42Q7RTR8 314 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 NIPA2Q8N8Q9 360 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 DLG3Q92796 817 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 COPS5Q92905 334 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 RMND5BQ96G75 393 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 OSMRQ99650 979 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 EGFL8Q99944 293 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SYT11Q9BT88 431 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 CROTQ9UKG9 612 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 ATRNL1Q5VV63 1379 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 KIF13AQ9H1H9 1805 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 BCLAF3A2AJT9 711 aaKnown RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 SIN3BO75182 1162 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 NDUFS3O75489 264 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 FARP2O94887 1054 aaPredicted RBP8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 EPHA3P29320 983 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 OGDHQ02218 1023 aa8.59□□□□□ -1.03
LIMCH1-216ENST00000512820 NRF1Q16656 503 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms