RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 DDX1Q92499 740 aaKnown RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 SIPA1Q96FS4 1042 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 TOE1Q96GM8 510 aaKnown RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 ZNF419Q96HQ0 510 aaPredicted RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 BTN2A3PQ96KV6 586 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 MRGPRX3Q96LB0 322 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 PRMT1Q99873 361 aaKnown RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 TRIM62Q9BVG3 475 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 GANQ9H2C0 597 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 FAM204AQ9H8W3 233 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 TMEM9BQ9NQ34 198 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 ITM2CQ9NQX7 267 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 ASNSD1Q9NWL6 643 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 WSB2Q9NYS7 404 aaPredicted RBP12.45□□□□□ -0.42
CDK7-208ENST00000512687 COX16Q9P0S2 106 aa12.45□□□□□ -0.42
CDK7-208ENST00000512687 KCNU1A8MYU2 1149 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 GIPC1O14908 333 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 EPHB6O15197 1021 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 HSF2BPO75031 334 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 NDUFS2O75306 463 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 LUC7L3O95232 432 aaKnown RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 IGLV3-19P01714 112 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 CFIP05156 583 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 GLI1P08151 1106 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 UCHL3P15374 230 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 POLR2EP19388 210 aaKnown RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 EEF1GP26641 437 aaKnown RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 CDH5P33151 784 aaPredicted RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 HOXD12P35452 270 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 KRT9P35527 623 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 GGCXP38435 758 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 CSKP41240 450 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 CTSOP43234 321 aaPredicted RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 MAPK8P45983 427 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 IRAK1P51617 712 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 KRT31Q15323 416 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 CT47A1Q5JQC4 288 aaPredicted RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 N4BP2L1Q5TBK1 243 aaPredicted RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 TAF3Q5VWG9 929 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 SLC26A9Q7LBE3 791 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 NOP9Q86U38 636 aaKnown RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 OR2I1PQ8NGU4 316 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 OR2T3Q8NH03 318 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 PRCCQ92733 491 aaPredicted RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 TTC17Q96AE7 1141 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 DDX50Q9BQ39 737 aaKnown RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 GPR174Q9BXC1 333 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 NUSAP1Q9BXS6 441 aaKnown RBP12.44□□□□□ -0.42
CDK7-208ENST00000512687 VPS16Q9H269 839 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 CAPN10Q9HC96 672 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 PRSS16Q9NQE7 514 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 DDIT4Q9NX09 232 aa12.44□□□□□ -0.42
CDK7-208ENST00000512687 F8VZ95 297 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 I6L893 689 aaPredicted RBP12.43□□□□□ -0.42
CDK7-208ENST00000512687 KCNK5O95279 499 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 SERPINF2P08697 491 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 CYP11B1P15538 503 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 MAOBP27338 520 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 MLLT3P42568 568 aaPredicted RBP12.43□□□□□ -0.42
CDK7-208ENST00000512687 RPS14P62263 151 aaKnown RBP12.43□□□□□ -0.42
CDK7-208ENST00000512687 CDK17Q00537 523 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 SLC6A3Q01959 620 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 CENPCQ03188 943 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 CDH18Q13634 790 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 E2F5Q15329 346 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 DUOXA1Q1HG43 343 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 C2CD6Q53TS8 623 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 PITRM1Q5JRX3 1037 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 EFHC1Q5JVL4 640 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 TRNP1Q6NT89 227 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 PSAPL1Q6NUJ1 521 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 FAM124AQ86V42 546 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 APCDD1Q8J025 514 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 ATP6V0D2Q8N8Y2 350 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 ZNF397Q8NF99 534 aaPredicted RBP12.43□□□□□ -0.42
CDK7-208ENST00000512687 EPS8L1Q8TE68 723 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 SLC20A1Q8WUM9 679 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 GBP4Q96PP9 640 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 ANLNQ9NQW6 1124 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDK7-208ENST00000512687 PLA2G4CQ9UP65 541 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 PTPRBP23467 1997 aa12.43□□□□□ -0.42
CDK7-208ENST00000512687 MAP1BP46821 2468 aaKnown RBP12.43□□□□□ -0.42
CDK7-208ENST00000512687 TYW5A2RUC4 315 aaKnown RBP12.42□□□□□ -0.42
CDK7-208ENST00000512687 F5H5T6 163 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 ATP5BP06576 529 aaKnown RBP12.42□□□□□ -0.42
CDK7-208ENST00000512687 MMEP08473 750 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 DPP6P42658 865 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 GABRB2P47870 512 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 STK19P49842 368 aaPredicted RBP12.42□□□□□ -0.42
CDK7-208ENST00000512687 NOMO3P69849 1222 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 NME3Q13232 169 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 UAP1L1Q3KQV9 507 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 DCAF12L1Q5VU92 463 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 CXorf57Q6NSI4 855 aaKnown RBP12.42□□□□□ -0.42
CDK7-208ENST00000512687 XYLT1Q86Y38 959 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 RGL4Q8IZJ4 473 aa12.42□□□□□ -0.42
CDK7-208ENST00000512687 CCAR2Q8N163 923 aaKnown RBP12.42□□□□□ -0.42
CDK7-208ENST00000512687 ZNF557Q8N988 423 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms