RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SSH2Q76I76 1423 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 BCLAF3A2AJT9 711 aaKnown RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 CAPN14A8MX76 684 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 H3BRB1 525 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 LDOC1O95751 146 aaPredicted RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 IRF2P14316 349 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 LAG3P18627 525 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 RCVRNP35243 200 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 SERPINB9P50453 376 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 PFKPQ01813 784 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 MYBPC2Q14324 1141 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 KNOP1Q1ED39 458 aaKnown RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 C6orf132Q5T0Z8 1188 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 CERCAMQ5T4B2 595 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 ATXN7L2Q5T6C5 722 aaPredicted RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 DET1Q7L5Y6 550 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 SMYD4Q8IYR2 804 aaPredicted RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 CNPY4Q8N129 248 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 DAW1Q8N136 415 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 MAML3Q96JK9 1138 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 OSMRQ99650 979 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 NIFKQ9BYG3 293 aaKnown RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 B3GAT2Q9NPZ5 323 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 RAB6BQ9NRW1 208 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 SETD4Q9NVD3 440 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 NOVA2Q9UNW9 492 aaKnown RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 SMCO3A2RU48 225 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 ANKRD34BA5PLL1 514 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 CDC25CP30307 473 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 BLKP51451 505 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 DMPKQ09013 629 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 KRT73Q86Y46 540 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 UBXN10Q96LJ8 280 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 FTHL17Q9BXU8 183 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 NDST4Q9H3R1 872 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 PHPT1Q9NRX4 125 aaPredicted RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 SHOC2Q9UQ13 582 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 GRIN2DO15399 1336 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 TRBV23OR9-2A0A075B6M9 112 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 SIN3BO75182 1162 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 DBIP07108 87 aaKnown RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 ADCYAP1R1P41586 468 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 MPPE1Q53F39 396 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 C16orf89Q6UX73 402 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 LRRC49Q8IUZ0 686 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 PRSS58Q8IYP2 241 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 NAT16Q8N8M0 369 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 RBBP8NLQ8NC74 664 aaPredicted RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 AGPAT1Q99943 283 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 METTL5Q9NRN9 209 aaKnown RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 DDX43Q9NXZ2 648 aaKnown RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 FBXW2Q9UKT8 454 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 RAD51BO15315 384 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 PGLSO95336 258 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 ITGAVP06756 1048 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 GJB1P08034 283 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 CHKAP35790 457 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 GALNT3Q14435 633 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 VPS72Q15906 364 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 TTC7BQ86TV6 843 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 TMEM151BQ8IW70 566 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 ZC3H7AQ8IWR0 971 aaKnown RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 PRCCQ92733 491 aaPredicted RBP9.11□□□□□ -0.95
VCAN-208ENST00000512590 CAPNS2Q96L46 248 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 FAM129BQ96TA1 746 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 DPYSL5Q9BPU6 564 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 TINF2Q9BSI4 451 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 FICDQ9BVA6 458 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 VTA1Q9NP79 307 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 NENFQ9UMX5 172 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 IQGAP2Q13576 1575 aa9.11□□□□□ -0.95
VCAN-208ENST00000512590 FTLP02792 175 aaPredicted RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 RAB25P57735 213 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 RBPJQ06330 500 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 RAPSNQ13702 412 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 TAF2Q6P1X5 1199 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 UNC13DQ70J99 1090 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 LRRN4CLQ8ND94 238 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 ERP27Q96DN0 273 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 SNF8Q96H20 258 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 LMLNQ96KR4 655 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 GAL3ST4Q96RP7 486 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 ADAM2Q99965 735 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 VCPKMTQ9H867 229 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 USP29Q9HBJ7 922 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 GPRC5DQ9NZD1 345 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 PHF11Q9UIL8 331 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 DNPEPQ9ULA0 475 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 RAD54BQ9Y620 910 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 DDX3YO15523 660 aaKnown RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 RAMP2O60895 175 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 TSC22D2O75157 780 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 UGT1A5P35504 534 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 RIDAP52758 137 aaKnown RBP9.1□□□□□ -0.95
VCAN-208ENST00000512590 KCNJ2P63252 427 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 FPGSQ05932 587 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 ILF3Q12906 894 aaKnown RBP eCLIP9.1□□□□□ -0.95
VCAN-208ENST00000512590 RNF43Q68DV7 783 aa9.1□□□□□ -0.95
VCAN-208ENST00000512590 OR2L5Q8NG80 312 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms