RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 ZDHHC13Q8IUH4 622 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 RBM12BQ8IXT5 1001 aaKnown RBP6.5□□□□□ -1.37
CHD1-208ENST00000512392 FAM133AQ8N9E0 248 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 SYT2Q8N9I0 419 aaPredicted RBP6.5□□□□□ -1.37
CHD1-208ENST00000512392 OR52M1Q8NGK5 317 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 OR14C36Q8NHC7 312 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 DUSP19Q8WTR2 217 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 PRPF31Q8WWY3 499 aaKnown RBP6.5□□□□□ -1.37
CHD1-208ENST00000512392 NAF1Q96HR8 494 aaKnown RBP6.5□□□□□ -1.37
CHD1-208ENST00000512392 FBXL18Q96ME1 805 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 WRNIP1Q96S55 665 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 IQCGQ9H095 443 aaKnown RBP6.5□□□□□ -1.37
CHD1-208ENST00000512392 GIMAP4Q9NUV9 329 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 TDP1Q9NUW8 608 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 MALT1Q9UDY8 824 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 ATP11BQ9Y2G3 1177 aa6.5□□□□□ -1.37
CHD1-208ENST00000512392 ZSCAN5BA6NJL1 495 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 GLOD5A6NK44 160 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 PRPF4O43172 522 aaKnown RBP eCLIP6.49□□□□□ -1.37
CHD1-208ENST00000512392 PCDH8O95206 1070 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 NTSR2O95665 410 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 RPLP2P05387 115 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 TXNP10599 105 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 IL1R2P27930 398 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 SLC6A9P48067 706 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 LMAN1P49257 510 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ALDH18A1P54886 795 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 CDH8P55286 799 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 YBX1P67809 324 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 PPARAQ07869 468 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 EFTUD2Q15029 972 aaKnown RBP eCLIP6.49□□□□□ -1.37
CHD1-208ENST00000512392 NTRK2Q16620 822 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 HADHQ16836 314 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 FAM187BQ17R55 369 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 NRN1LQ496H8 165 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 CYP27C1Q4G0S4 372 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 MCMDC2Q4G0Z9 681 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 LRRC24Q50LG9 513 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 HABP4Q5JVS0 413 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 CACNA2D4Q7Z3S7 1137 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 MB21D1Q8N884 522 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 FOXRED1Q96CU9 486 aaPredicted RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 ELP4Q96EB1 424 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 NRBF2Q96F24 287 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 C8orf76Q96K31 380 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 SPATA13Q96N96 652 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 WNT8AQ9H1J5 351 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 SLC32A1Q9H598 525 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 WDR26Q9H7D7 661 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 PFDN4Q9NQP4 134 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 MARCH4Q9P2E8 410 aaPredicted RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 SLC25A10Q9UBX3 287 aaPredicted RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 LIMA1Q9UHB6 759 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 SARDHQ9UL12 918 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 PSME2Q9UL46 239 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 PADI1Q9ULC6 663 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 USP18Q9UMW8 372 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 CAPN7Q9Y6W3 813 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 FAM237BA0A1B0GVD1 139 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 XKRY2A2RUG3 117 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 CD3EAPO15446 510 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 BUB1BO60566 1050 aaPredicted RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 SPAG6O75602 509 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 KCNK5O95279 499 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 FAM87AP0C7U9 286 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 PRDX5P30044 214 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 BSGP35613 385 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 PMS2P54278 862 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ERVFC1P60507 584 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ARF5P84085 180 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 TMEM115Q12893 351 aaPredicted RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 BNIP1Q12981 228 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 SNTB1Q13884 538 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 ANKRD20A4Q4UJ75 823 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ANKRD20A8PQ5CZ79 823 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ANKRD20A2Q5SQ80 823 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ANKRD20A1Q5TYW2 823 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ANKRD20A3Q5VUR7 823 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 MFSD7Q6UXD7 560 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ARHGAP27Q6ZUM4 889 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ARMC9Q7Z3E5 817 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 KRT28Q7Z3Y7 464 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 BNIPLQ7Z465 357 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 HOOK3Q86VS8 718 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 SGMS1Q86VZ5 419 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 FAM9CQ8IZT9 166 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 SHISA5Q8N114 240 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 SLC15A4Q8N697 577 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 MDM1Q8TC05 714 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 BRIX1Q8TDN6 353 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 CHURC1Q8WUH1 139 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 RBM17Q96I25 401 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 CNOT6LQ96LI5 555 aaKnown RBP6.49□□□□□ -1.37
CHD1-208ENST00000512392 RMDN2Q96LZ7 410 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 GBP4Q96PP9 640 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 INTS14Q96SY0 518 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 DUSP23Q9BVJ7 150 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 OSBPL1AQ9BXW6 950 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 ZNF341Q9BYN7 854 aa6.49□□□□□ -1.37
CHD1-208ENST00000512392 DENND2DQ9H6A0 471 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms