RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 CDK5RAP1Q96SZ6 601 aaKnown RBP12.49□□□□□ -0.41
COPS4-210ENST00000511708 PAXBP1Q9Y5B6 917 aa12.49□□□□□ -0.41
COPS4-210ENST00000511708 USP3Q9Y6I4 520 aa12.49□□□□□ -0.41
COPS4-210ENST00000511708 FRMD3A2A2Y4 597 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 FAM200BP0CF97 657 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 RALAP11233 206 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 TGM2P21980 687 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 SLC8A1P32418 973 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 LONP1P36776 959 aaKnown RBP12.48□□□□□ -0.41
COPS4-210ENST00000511708 FOXK1P85037 733 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 ARID5BQ14865 1188 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 PSMD6Q15008 389 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 USP53Q70EK8 1073 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 SND1Q7KZF4 910 aaKnown RBP eCLIP12.48□□□□□ -0.41
COPS4-210ENST00000511708 WFDC5Q8TCV5 224 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 FAM131CQ96AQ9 280 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 OMDQ99983 421 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 ABCG4Q9H172 646 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 OSBPL2Q9H1P3 480 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 USP29Q9HBJ7 922 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 KIAA1586Q9HCI6 787 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 HMGXB4Q9UGU5 601 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 KIF3AQ9Y496 699 aa12.48□□□□□ -0.41
COPS4-210ENST00000511708 FFAR2O15552 330 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 NOBOXO60393 691 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 RNASEH1O60930 286 aaKnown RBP12.47□□□□□ -0.41
COPS4-210ENST00000511708 PPFIA2O75334 1257 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 GJB6O95452 261 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 GOT1P17174 413 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 NUDT1P36639 197 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 ZNF445P59923 1031 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 TRPC3Q13507 836 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 TRIP4Q15650 581 aaPredicted RBP12.47□□□□□ -0.41
COPS4-210ENST00000511708 SNRNP35Q16560 246 aaKnown RBP12.47□□□□□ -0.41
COPS4-210ENST00000511708 HS1BP3Q53T59 392 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 C9orf64Q5T6V5 341 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 MMAAQ8IVH4 418 aaKnown RBP12.47□□□□□ -0.41
COPS4-210ENST00000511708 ARL14Q8N4G2 192 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 FAM26EQ8N5C1 309 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 C12orf29Q8N999 325 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 OR14C36Q8NHC7 312 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 RASSF8Q8NHQ8 419 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 MAPK15Q8TD08 544 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 JAKMIP2Q96AA8 810 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 TTC17Q96AE7 1141 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 LMLNQ96KR4 655 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 MRGPRX3Q96LB0 322 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 SLC25A18Q9H1K4 315 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 EPN3Q9H201 632 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 FAM49BQ9NUQ9 324 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 NLGN3Q9NZ94 848 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
COPS4-210ENST00000511708 MARCH2Q9P0N8 246 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 STK17AQ9UEE5 414 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 CYTH4Q9UIA0 394 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 STOML2Q9UJZ1 356 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 DMTF1Q9Y222 760 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 CRYBG3Q68DQ2 2970 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 CELSR2Q9HCU4 2923 aa12.47□□□□□ -0.41
COPS4-210ENST00000511708 ZFC3H1O60293 1989 aaKnown RBP12.47□□□□□ -0.41
COPS4-210ENST00000511708 LRRK1Q38SD2 2015 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 BLACEA4D250 179 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 PIAS2O75928 621 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 KRT38O76015 456 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 TNFSF15O95150 251 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 ITGA2BP08514 1039 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 POLR2EP19388 210 aaKnown RBP12.46□□□□□ -0.41
COPS4-210ENST00000511708 ADORA2BP29275 332 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 CD70P32970 193 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 HOXD13P35453 343 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 NDST1P52848 882 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 CYP24A1Q07973 514 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 SRSF6Q13247 344 aaKnown RBP12.46□□□□□ -0.41
COPS4-210ENST00000511708 TBR1Q16650 682 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 ZNF667Q5HYK9 610 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 SCARA5Q6ZMJ2 495 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 PRPF39Q86UA1 669 aaKnown RBP12.46□□□□□ -0.41
COPS4-210ENST00000511708 KDM1BQ8NB78 822 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 WDR36Q8NI36 951 aaKnown RBP12.46□□□□□ -0.41
COPS4-210ENST00000511708 IFI44Q8TCB0 444 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 CCDC127Q96BQ5 260 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 PLD4Q96BZ4 506 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 FAM129BQ96TA1 746 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 CAAP1Q9H8G2 361 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 KLHL11Q9NVR0 708 aa12.46□□□□□ -0.41
COPS4-210ENST00000511708 GEMIN8Q9NWZ8 242 aaKnown RBP12.46□□□□□ -0.41
COPS4-210ENST00000511708 TBC1D3DA0A087WVF3 549 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 TBC1D3IA0A087WXS9 549 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 TBC1D3EA0A087X179 549 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 TBC1D3KA0A087X1G2 549 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 SLC12A8A0AV02 714 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 TARSL2A2RTX5 802 aaKnown RBP12.45□□□□□ -0.42
COPS4-210ENST00000511708 TBC1D3FA6NER0 549 aaPredicted RBP12.45□□□□□ -0.42
COPS4-210ENST00000511708 TBC1D3LB9A6J9 549 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 TBC1D3HP0C7X1 549 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 THEGLP0DJG4 465 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 ALPPL2P10696 532 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 C5AR1P21730 350 aa12.45□□□□□ -0.42
COPS4-210ENST00000511708 DRD3P35462 400 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms