RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 IFNAR2P48551 515 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 NOVA1P51513 510 aaKnown RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 DGKEP52429 567 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 OXCT1P55809 520 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 PSMC1P62191 440 aaKnown RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 ELF2Q15723 593 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 NKPD1Q17RQ9 610 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 FBXO43Q4G163 708 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 PMS2CLQ68D20 193 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 SLFN12LQ6IEE8 588 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ANO7Q6IWH7 933 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 SCN4BQ8IWT1 228 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ADGRF2Q8IZF7 708 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ARHGEF39Q8N4T4 335 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 SH3RF2Q8TEC5 729 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 KBTBD7Q8WVZ9 684 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ATP2A3Q93084 1043 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 KISS1RQ969F8 398 aaPredicted RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 DNAJC19Q96DA6 116 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 SGSM3Q96HU1 749 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ACBD6Q9BR61 282 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 CBWD1Q9BRT8 395 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 MTMR12Q9C0I1 747 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 TMEM206Q9H813 350 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ZDHHC4Q9NPG8 344 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 RBAKQ9NYW8 714 aaPredicted RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 EBF1Q9UH73 591 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 WASF3Q9UPY6 502 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 KIF3AQ9Y496 699 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 NME7Q9Y5B8 376 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 SNX9Q9Y5X1 595 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ANKRD62A6NC57 917 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 H0Y8X5 98 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 K7EQS6 105 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 EIF5BO60841 1220 aaKnown RBP7.08□□□□□ -1.28
COPS4-209ENST00000511653 HUS1O60921 280 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 KCNH1O95259 989 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 PROS1P07225 676 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 LMO2P25791 158 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 PNPLA4P41247 253 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 RPL10AP62906 217 aaKnown RBP7.08□□□□□ -1.28
COPS4-209ENST00000511653 AMPD2Q01433 879 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 MYL7Q01449 175 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 POU5F1Q01860 360 aaKnown RBP7.08□□□□□ -1.28
COPS4-209ENST00000511653 KCNB1Q14721 858 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 NUMA1Q14980 2115 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 RABEP1Q15276 862 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 SOWAHAQ2M3V2 549 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 CFAP221Q4G0U5 840 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 L1TD1Q5T7N2 865 aaKnown RBP7.08□□□□□ -1.28
COPS4-209ENST00000511653 KIAA0907Q7Z7F0 614 aaPredicted RBP7.08□□□□□ -1.28
COPS4-209ENST00000511653 TRIM59Q8IWR1 403 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 CCDC33Q8N5R6 958 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 CSGALNACT2Q8N6G5 542 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 LRRC52Q8N7C0 313 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 MDGA1Q8NFP4 955 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 TSTD1Q8NFU3 115 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 OR5B17Q8NGF7 314 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 USP33Q8TEY7 942 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 NOC3LQ8WTT2 800 aaKnown RBP7.08□□□□□ -1.28
COPS4-209ENST00000511653 MYLPFQ96A32 169 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 HVCN1Q96D96 273 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 MRPL44Q9H9J2 332 aaKnown RBP7.08□□□□□ -1.28
COPS4-209ENST00000511653 PDE11AQ9HCR9 933 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 CRTAC1Q9NQ79 661 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 TMEM30AQ9NV96 361 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 GDAP2Q9NXN4 497 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 UXTQ9UBK9 157 aaPredicted RBP7.08□□□□□ -1.28
COPS4-209ENST00000511653 ARHGAP26Q9UNA1 814 aa7.08□□□□□ -1.28
COPS4-209ENST00000511653 MAST4O15021 2626 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 CDX4O14627 284 aaPredicted RBP7.07□□□□□ -1.28
COPS4-209ENST00000511653 GABRDO14764 452 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 PPM1BO75688 479 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 RHOBTB1O94844 696 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 GCNT3O95395 438 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 CYP17A1P05093 508 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 KRT19P08727 400 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 ITIH2P19823 946 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 BDNFP23560 247 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 ABCD1P33897 745 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 CACNA2D1P54289 1103 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 NKAPLQ5M9Q1 402 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 FAM171BQ6P995 826 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 UNQ6494/PRO21346Q6UXR6 183 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 LIMS2Q7Z4I7 341 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 FILIP1Q7Z7B0 1213 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 RASSF3Q86WH2 238 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 SPATA2LQ8IUW3 424 aaPredicted RBP7.07□□□□□ -1.28
COPS4-209ENST00000511653 TMEM86AQ8N2M4 240 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 FRMD1Q8N878 549 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 RLN3Q8WXF3 142 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 CNOT6LQ96LI5 555 aaKnown RBP7.07□□□□□ -1.28
COPS4-209ENST00000511653 CLIC6Q96NY7 704 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 SYT15Q9BQS2 421 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 HDAC8Q9BY41 377 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 PCIF1Q9H4Z3 704 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 FBXO2Q9UK22 296 aaPredicted RBP7.07□□□□□ -1.28
COPS4-209ENST00000511653 ITGA11Q9UKX5 1188 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 MMP17Q9ULZ9 603 aa7.07□□□□□ -1.28
COPS4-209ENST00000511653 ST14Q9Y5Y6 855 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms