RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 PARD3BQ8TEW8 1205 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 RSAD2Q8WXG1 361 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 BSNDQ8WZ55 320 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 FGF14Q92915 247 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DCUN1D1Q96GG9 259 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ELF4Q99607 663 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DUSP16Q9BY84 665 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CLPBQ9H078 707 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 POLR1BQ9H9Y6 1135 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 XPNPEP1Q9NQW7 623 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 RBM12Q9NTZ6 932 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ASNSD1Q9NWL6 643 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ZNHIT2Q9UHR6 403 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TEKT2Q9UIF3 430 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SALL4Q9UJQ4 1053 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 GGA2Q9UJY4 613 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SLC27A6Q9Y2P4 619 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SCINQ9Y6U3 715 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MORC2Q9Y6X9 1032 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TTC28Q96AY4 2481 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TCF20Q9UGU0 1960 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 LRRC37A2A6NM11 1700 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 GOLGA8IPA6NC78 632 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 GOLGA8JA6NMD2 632 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF839A8K0R7 811 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 AP3B1O00203 1094 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PIRO00625 290 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TPP1O14773 563 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 XPO1O14980 1071 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 VILLO15195 856 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PSMD3O43242 534 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ACTN4O43707 911 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DPM1O60762 260 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TM7SF2O76062 418 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MOCS2O96007 188 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ATP1A1P05023 1023 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 GP1BAP07359 652 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TNFAIP3P21580 790 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PMLP29590 882 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 HPDP32754 393 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MAP3K7CLP57077 242 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 RHOAP61586 193 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ECT2LQ008S8 904 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DEUP1Q05D60 604 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CYP24A1Q07973 514 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SCAPQ12770 1279 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MRPL58Q14197 206 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PAOXQ6QHF9 649 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 C11orf57Q6ZUT1 292 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TAF8Q7Z7C8 310 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 KDF1Q8NAX2 398 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SUMF1Q8NBK3 374 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TBATAQ96M53 351 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SCNM1Q9BWG6 230 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CALN1Q9BXU9 219 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MAGEB5Q9BZ81 275 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TRIM9Q9C026 710 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CEP44Q9C0F1 390 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PABPC3Q9H361 631 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 FBRSL1Q9HCM7 1045 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PDE7BQ9NP56 450 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SLAMF7Q9NQ25 335 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DNAJC28Q9NX36 388 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CALCOCO1Q9P1Z2 691 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 THAP10Q9P2Z0 257 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DKK4Q9UBT3 224 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MYO6Q9UM54 1294 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 RALGAPA2Q2PPJ7 1873 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 COL11A1P12107 1806 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 FAM221BA6H8Z2 402 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF840PA6NDX5 716 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 RASA4BC9J798 803 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 FAM47E-STBD1D6RA91 191 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SNPHO15079 494 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 RASA4O43374 803 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DUX1O43812 170 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CILPO75339 1184 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SUN1O94901 812 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 AFPP02771 609 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 EDN1P05305 212 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 GSPT1P15170 499 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CD58P19256 250 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TCN2P20062 427 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CD72P21854 359 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CXCR2P25025 360 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PTPN3P26045 913 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 PEX19P40855 299 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 LSSP48449 732 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CDH4P55283 916 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SF3A2Q15428 464 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 SEPT7Q16181 437 aaKnown RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 ECM1Q16610 540 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 LONRF1Q17RB8 773 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 MAP7D1Q3KQU3 841 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 C8orf34Q49A92 452 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 CCDC122Q5T0U0 273 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TIGD7Q6NT04 549 aaPredicted RBP2.93□□□□□ -1.94
CLOCK-209ENST00000511124 TTI2Q6NXR4 508 aa2.93□□□□□ -1.94
CLOCK-209ENST00000511124 DNAJC14Q6Y2X3 702 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms