RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 KRT4P19013 534 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 MX2P20592 715 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 CA4P22748 312 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 YY1P25490 414 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PTPN3P26045 913 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PSMB4P28070 264 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 HOXD10P28358 340 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 CYP2C18P33260 490 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 HTR7P34969 479 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SERPINB6P35237 376 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 RPA3P35244 121 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 LIG3P49916 1009 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SLC5A3P53794 718 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SLC18A2Q05940 514 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 ACTN3Q08043 901 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 NIPAL4Q0D2K0 466 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 FAAP100Q0VG06 881 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 GALNT2Q10471 571 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 NAB1Q13506 487 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 EIF4EBP2Q13542 120 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 FRG1Q14331 258 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SLC1A5Q15758 541 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 ZKSCAN8Q15776 578 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SPRED3Q2MJR0 410 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PARP6Q2NL67 630 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 ARL13BQ3SXY8 428 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 NOMO2Q5JPE7 1267 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 BRMS1LQ5PSV4 323 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 FAM182AQ5T1J6 154 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SYCP2LQ5T4T6 812 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 ARTNQ5T4W7 220 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 MANEALQ5VSG8 457 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 BSPRYQ5W0U4 402 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 LRRC8BQ6P9F7 803 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 ZNF449Q6P9G9 518 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 LIAT1Q6ZQX7 453 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 C4orf50Q6ZRC1 276 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 FAM43BQ6ZT52 329 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SH2D5Q6ZV89 423 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 CYS1Q717R9 158 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SLC24A5Q71RS6 500 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PDZD4Q76G19 769 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SPATA21Q7Z572 469 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PRPF39Q86UA1 669 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 RTN4RL1Q86UN2 441 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 TAX1BP1Q86VP1 789 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SLC26A11Q86WA9 606 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 LRRC6Q86X45 466 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 CHSY1Q86X52 802 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SPATA2LQ8IUW3 424 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 KLHDC8BQ8IXV7 354 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 COLGALT2Q8IYK4 626 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 ZNF567Q8N184 647 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 THEM5Q8N1Q8 247 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 MPP5Q8N3R9 675 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 CCDC33Q8N5R6 958 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 OTUD6BQ8N6M0 293 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 URGCPQ8TCY9 931 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 RAET1EQ8TD07 263 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 HASPINQ8TF76 798 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PPM1EQ8WY54 764 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 EDEM1Q92611 657 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 DPF3Q92784 378 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 GRAMD1AQ96CP6 724 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 HDAC11Q96DB2 347 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 MRRFQ96E11 262 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 STAMBPL1Q96FJ0 436 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 P2RY11Q96G91 374 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 FUBP3Q96I24 572 aaKnown RBP eCLIP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 CABS1Q96KC9 395 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SIGLEC10Q96LC7 697 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 GLT1D1Q96MS3 346 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 EBNA1BP2Q99848 306 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 ELAC2Q9BQ52 826 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 FERMT1Q9BQL6 677 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 GORASP1Q9BQQ3 440 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PLCD4Q9BRC7 762 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 COLEC11Q9BWP8 271 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 ZCWPW1Q9H0M4 648 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 TRPV6Q9H1D0 765 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 OSBPL2Q9H1P3 480 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 GBA3Q9H227 469 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 RASSF4Q9H2L5 321 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 KDM4CQ9H3R0 1056 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 GPBP1L1Q9HC44 474 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SMYD2Q9NRG4 433 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 TBC1D13Q9NVG8 400 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 ARHGEF38Q9NXL2 777 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PRKAG3Q9UGI9 489 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 GRID1Q9ULK0 1009 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 SLC12A4Q9UP95 1085 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PHF24Q9UPV7 400 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 USP15Q9Y4E8 981 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 PCDHA11Q9Y5I1 949 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 FRMPD3Q5JV73 1810 aa4.9□□□□□ -1.63
PDLIM5-214ENST00000510099 WDR27A2RRH5 827 aa4.89□□□□□ -1.63
PDLIM5-214ENST00000510099 ERI2A8K979 691 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-214ENST00000510099 CXorf49A8MYA2 514 aaPredicted RBP4.89□□□□□ -1.63
PDLIM5-214ENST00000510099 TRIM49D1C9J1S8 452 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms