RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GJB7Q6PEY0 223 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 GBP6Q6ZN66 633 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 MMS22LQ6ZRQ5 1243 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 BEND5Q7L4P6 421 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 TMEM110Q86TL2 294 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 CHSY1Q86X52 802 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 RNF34Q969K3 372 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 MYEOVQ96EZ4 313 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 SLC39A13Q96H72 371 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 PRICKLE1Q96MT3 831 aaPredicted RBP15.94■□□□□ 0.14
TPM3-219ENST00000509409 IL21RQ9HBE5 538 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 SGK2Q9HBY8 427 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 ACP6Q9NPH0 428 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 ZMIZ1Q9ULJ6 1067 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 NEUROG3Q9Y4Z2 214 aa15.94■□□□□ 0.14
TPM3-219ENST00000509409 SYNJ2BP-COX16A0A087WUM0 186 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 FAM47DPA6NHR8 397 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 PAPSS1O43252 624 aaPredicted RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 TRUB2O95900 331 aaKnown RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 TACR2P21452 398 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 MTIF2P46199 727 aaKnown RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 AFF3P51826 1226 aaKnown RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 SFSWAPQ12872 951 aaKnown RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 EXOC3L4Q17RC7 722 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 FSCBQ5H9T9 825 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 RNF219Q5W0B1 726 aaPredicted RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 DHX40Q8IX18 779 aaKnown RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 ATP6V0D2Q8N8Y2 350 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 LMLNQ96KR4 655 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 THAP9Q9H5L6 903 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 TM7SF3Q9NS93 570 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 COX16Q9P0S2 106 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 KIAA1522Q9P206 1035 aaPredicted RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 CYTH4Q9UIA0 394 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 XPO7Q9UIA9 1087 aaKnown RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 KLK13Q9UKR3 277 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 INTS6Q9UL03 887 aaKnown RBP15.93■□□□□ 0.14
TPM3-219ENST00000509409 ERVW-1Q9UQF0 538 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 MSRB2Q9Y3D2 182 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 CEP192Q8TEP8 1941 aa15.93■□□□□ 0.14
TPM3-219ENST00000509409 PCNX2A6NKB5 2137 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 ADAMTS9Q9P2N4 1935 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 TMEM8BA6NDV4 472 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 SIN3BO75182 1162 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 LUC7L3O95232 432 aaKnown RBP15.92■□□□□ 0.14
TPM3-219ENST00000509409 UBE2HP62256 183 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 CDK17Q00537 523 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 BNC1Q01954 994 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 SUZ12Q15022 739 aaKnown RBP15.92■□□□□ 0.14
TPM3-219ENST00000509409 MEA1Q16626 185 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 HNRNPA1L2Q32P51 320 aaKnown RBP15.92■□□□□ 0.14
TPM3-219ENST00000509409 PITRM1Q5JRX3 1037 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 TRIM65Q6PJ69 517 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 ADAT2Q7Z6V5 191 aaKnown RBP15.92■□□□□ 0.14
TPM3-219ENST00000509409 KDF1Q8NAX2 398 aaPredicted RBP15.92■□□□□ 0.14
TPM3-219ENST00000509409 BIRC7Q96CA5 298 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 BTN2A3PQ96KV6 586 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 FAM204AQ9H8W3 233 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.92■□□□□ 0.14
TPM3-219ENST00000509409 FBXL12Q9NXK8 326 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 SCML1Q9UN30 329 aa15.92■□□□□ 0.14
TPM3-219ENST00000509409 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.92■□□□□ 0.14
TPM3-219ENST00000509409 KMT2BQ9UMN6 2715 aaPredicted RBP15.92■□□□□ 0.14
TPM3-219ENST00000509409 TTC34A8MYJ7 566 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 F5H5T6 163 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 SRPRAP08240 638 aaKnown RBP15.91■□□□□ 0.14
TPM3-219ENST00000509409 FTH1P19P0C7X4 201 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 ABCB4P21439 1286 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 NNMTP40261 264 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 CTSOP43234 321 aaPredicted RBP15.91■□□□□ 0.14
TPM3-219ENST00000509409 ECT2LQ008S8 904 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 APBA1Q02410 837 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 PTK2Q05397 1052 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 PDCLQ13371 301 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 TAF5Q15542 800 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 OR6B2Q6IFH4 312 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 PASD1Q8IV76 773 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 MMAAQ8IVH4 418 aaKnown RBP15.91■□□□□ 0.14
TPM3-219ENST00000509409 DEFB106AQ8N104 65 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 PNPLA1Q8N8W4 532 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 C1orf216Q8TAB5 229 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 RHBDD1Q8TEB9 315 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 GATA6Q92908 595 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 PPP1R13BQ96KQ4 1090 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 MRGPRX3Q96LB0 322 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 OMDQ99983 421 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 RSPH9Q9H1X1 276 aaPredicted RBP15.91■□□□□ 0.14
TPM3-219ENST00000509409 PABPC3Q9H361 631 aaKnown RBP15.91■□□□□ 0.14
TPM3-219ENST00000509409 TM9SF3Q9HD45 589 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 APEX2Q9UBZ4 518 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 APOBEC2Q9Y235 224 aaKnown RBP15.91■□□□□ 0.14
TPM3-219ENST00000509409 ANKRD6Q9Y2G4 727 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 FNDC3AQ9Y2H6 1198 aaKnown RBP15.91■□□□□ 0.14
TPM3-219ENST00000509409 SNX11Q9Y5W9 270 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 CACNA1EQ15878 2313 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 CEP295Q9C0D2 2601 aa15.91■□□□□ 0.14
TPM3-219ENST00000509409 EDDM13A0A1B0GTR0 161 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 A0A1W2PP55 124 aa15.9■□□□□ 0.14
TPM3-219ENST00000509409 TARSL2A2RTX5 802 aaKnown RBP15.9■□□□□ 0.14
TPM3-219ENST00000509409 BECN2A8MW95 431 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms