RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SERPINA13PQ6UXR4 307 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 CHST9Q7L1S5 443 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 TMEM110Q86TL2 294 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.32□□□□□ -0.6
RNF4-212ENST00000509258 GOLGA1Q92805 767 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 TMA16Q96EY4 203 aaKnown RBP11.32□□□□□ -0.6
RNF4-212ENST00000509258 NUP58Q9BVL2 599 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 PCED1AQ9H1Q7 454 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 TMEM245Q9H330 911 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 FBRSQ9HAH7 460 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
RNF4-212ENST00000509258 LMBRD1Q9NUN5 540 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 STIM2Q9P246 746 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 APEX2Q9UBZ4 518 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 APOBEC2Q9Y235 224 aaKnown RBP11.32□□□□□ -0.6
RNF4-212ENST00000509258 LAMA5O15230 3695 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 CHD5Q8TDI0 1954 aa11.32□□□□□ -0.6
RNF4-212ENST00000509258 PTPRBP23467 1997 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 TYW5A2RUC4 315 aaKnown RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 METTL12A8MUP2 240 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 FOXN3O00409 490 aaPredicted RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 BCAT2O15382 392 aaPredicted RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 CBFA2T3O75081 653 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 GRAP2O75791 330 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 FBXO21O94952 628 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 MOCS2O96007 188 aaPredicted RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 ERBB2P04626 1255 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 EPHX1P07099 455 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 PABPC1P11940 636 aaKnown RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 USP8P40818 1118 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 MATKP42679 507 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 CTSOP43234 321 aaPredicted RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 MTIF2P46199 727 aaKnown RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 SFSWAPQ12872 951 aaKnown RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 COL9A2Q14055 689 aaPredicted RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 EXOC3L4Q17RC7 722 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 ZC3H12AQ5D1E8 599 aaKnown RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 DCAF12L1Q5VU92 463 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 MBLAC2Q68D91 279 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 LRSAM1Q6UWE0 723 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 GBP6Q6ZN66 633 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 GLRX5Q86SX6 157 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 SLC47A2Q86VL8 602 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 CCDC117Q8IWD4 279 aaPredicted RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 MLKLQ8NB16 471 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 C1orf131Q8NDD1 294 aaKnown RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 GPT2Q8TD30 523 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 FAM149B1Q96BN6 582 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 DDX50Q9BQ39 737 aaKnown RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
RNF4-212ENST00000509258 ANLNQ9NQW6 1124 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 GGA2Q9UJY4 613 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 DNAJC12Q9UKB3 198 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 PCOLCE2Q9UKZ9 415 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 PLA2G4CQ9UP65 541 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 FHOD1Q9Y613 1164 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 ITPR1Q14643 2758 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 PLXNB3Q9ULL4 1909 aa11.31□□□□□ -0.6
RNF4-212ENST00000509258 GTPBP10A4D1E9 387 aaKnown RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 I6L893 689 aaPredicted RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 FLRT2O43155 660 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 IRAK2O43187 625 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 TRUB2O95900 331 aaKnown RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 CAPNS1P04632 268 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 ATP5BP06576 529 aaKnown RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 TFE3P19532 575 aaPredicted RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 KLK7P49862 253 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 AFF3P51826 1226 aaKnown RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 BNC1Q01954 994 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 SCAPQ12770 1279 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 CAMK2GQ13555 558 aaPredicted RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 MAN2A1Q16706 1144 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 PTPN20Q4JDL3 420 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 DCAF6Q58WW2 860 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 MS4A13Q5J8X5 152 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 ARTNQ5T4W7 220 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 RAP1GAP2Q684P5 730 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 CCNI2Q6ZMN8 369 aaPredicted RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 FAM183BPQ6ZVS7 135 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 ENOSF1Q7L5Y1 443 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 CIR1Q86X95 450 aaPredicted RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 UNC45BQ8IWX7 931 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 AHI1Q8N157 1196 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 PNPLA1Q8N8W4 532 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 SETD7Q8WTS6 366 aaKnown RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 STK32AQ8WU08 396 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 MRGPRX3Q96LB0 322 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 PRMT1Q99873 361 aaKnown RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 THAP9Q9H5L6 903 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 GAREM1Q9H706 876 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 TM7SF3Q9NS93 570 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 EIF2B4Q9UI10 523 aaKnown RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 PCDHGC3Q9UN70 934 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 TLR6Q9Y2C9 796 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 FNDC3AQ9Y2H6 1198 aaKnown RBP11.3□□□□□ -0.6
RNF4-212ENST00000509258 APC2O95996 2303 aa11.3□□□□□ -0.6
RNF4-212ENST00000509258 ACACAQ13085 2346 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms