RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 LPPQ93052 612 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 NPY6RQ99463 290 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 PRDM16Q9HAZ2 1276 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 SLC17A6Q9P2U8 582 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 WASF2Q9Y6W5 498 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 CASTOR2A6NHX0 329 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 FAM159BA6NKW6 160 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 MEIS3P2A8K0S8 358 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 CCDC22O60826 627 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 TGDSO95455 350 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 BST1Q10588 318 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 RCN1Q15293 331 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 OXNAD1Q96HP4 312 aaPredicted RBP11.26□□□□□ -0.61
SEC31A-228ENST00000509142 CLPTM1LQ96KA5 538 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 TUBB6Q9BUF5 446 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 PIGVQ9NUD9 493 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 FAM105AQ9NUU6 356 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 MAGED2Q9UNF1 606 aaPredicted RBP11.26□□□□□ -0.61
SEC31A-228ENST00000509142 ADRA1BP35368 520 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 MRPS6P82932 125 aaKnown RBP11.26□□□□□ -0.61
SEC31A-228ENST00000509142 GRIK3Q13003 919 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 CAPRIN2Q6IMN6 1127 aaKnown RBP11.26□□□□□ -0.61
SEC31A-228ENST00000509142 CRLF3Q8IUI8 442 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 DTX3LQ8TDB6 740 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 KCTD13Q8WZ19 329 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 KCNK16Q96T55 309 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 DCLRE1BQ9H816 532 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 ZFATQ9P243 1243 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 MYBPHLA2RUH7 354 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 YJEFN3A6XGL0 299 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 E7ENQ6 273 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 NRP1O14786 923 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 MLNP12872 115 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 ERCC2P18074 760 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 IGFBP6P24592 240 aaPredicted RBP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 GMPRP36959 345 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 LRRC8BQ6P9F7 803 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 CES3Q6UWW8 571 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 PAQR9Q6ZVX9 377 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 FAM35AQ86V20 835 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 CCNJLQ8IV13 435 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 ARID3BQ8IVW6 561 aaPredicted RBP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 EDEM1Q92611 657 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 OLFM3Q96PB7 478 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 PPP1R10Q96QC0 940 aaKnown RBP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■■□□□ 11.5
SEC31A-228ENST00000509142 MARCOQ9UEW3 520 aaPredicted RBP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 EME2A4GXA9 379 aaPredicted RBP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 MAGEA3P43357 314 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 CLCNKBP51801 687 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 PURAQ00577 322 aaKnown RBP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 OCRLQ01968 901 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 CBLBQ13191 982 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 SH3TC2Q8TF17 1288 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 PCED1BQ96HM7 432 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 RILPQ96NA2 401 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 SPC25Q9HBM1 224 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 CRTAC1Q9NQ79 661 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 TRPV2Q9Y5S1 764 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 USP3Q9Y6I4 520 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 RPS6KL1Q9Y6S9 549 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 GYG2O15488 501 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 POLBP06746 335 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 ESRRAP11474 423 aaPredicted RBP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 AKR1A1P14550 325 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 YY1P25490 414 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 CNTFP26441 200 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 SCNN1GP51170 649 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 PAN2Q504Q3 1202 aaKnown RBP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 SNX30Q5VWJ9 437 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 NAIF1Q69YI7 327 aaPredicted RBP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 ZCCHC23Q6ZST2 131 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 RASSF3Q86WH2 238 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 ZNF567Q8N184 647 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 TMEM86AQ8N2M4 240 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.25□□□□□ -0.61
SEC31A-228ENST00000509142 STKLD1Q8NE28 680 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 MCUR1Q96AQ8 359 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 ZNF778Q96MU6 729 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 EBF4Q9BQW3 602 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 NAT9Q9BTE0 207 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 RRAGCQ9HB90 399 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 BFARQ9NZS9 450 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 PLA2G4CQ9UP65 541 aa11.25□□□□□ -0.61
SEC31A-228ENST00000509142 LIN7AO14910 233 aaPredicted RBP11.24□□□□□ -0.61
SEC31A-228ENST00000509142 HNRNPCL1O60812 293 aaKnown RBP11.24□□□□□ -0.61
SEC31A-228ENST00000509142 IL1BP01584 269 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 LTFP02788 710 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 PGAM1P18669 254 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 PCSK1P29120 753 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 GLUD2P49448 558 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 DAOAP59103 153 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 METTL23Q86XA0 190 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 DNAJC9Q8WXX5 260 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 PGLYRP2Q96PD5 576 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 WDCPQ9H6R7 721 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 SIRPGQ9P1W8 387 aa11.24□□□□□ -0.61
SEC31A-228ENST00000509142 PPARGC1AQ9UBK2 798 aaKnown RBP11.24□□□□□ -0.61
SEC31A-228ENST00000509142 KLF11O14901 512 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms