RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 M0QYT0 321 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 GFPT2O94808 682 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 STAT1P42224 750 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 RNASE9P60153 205 aaKnown RBP19.29■□□□□ 0.68
UBE3D-207ENST00000509102 UBXN1Q04323 297 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 TYRO3Q06418 890 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 ZNF33AQ06730 810 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 SYCP1Q15431 976 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 NOP9Q86U38 636 aaKnown RBP19.29■□□□□ 0.68
UBE3D-207ENST00000509102 OR2T3Q8NH03 318 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 WFDC5Q8TCV5 224 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 EPS8L1Q8TE68 723 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 MKRN2Q9H000 416 aaKnown RBP19.29■□□□□ 0.68
UBE3D-207ENST00000509102 GANQ9H2C0 597 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 TMEM245Q9H330 911 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 NLRC4Q9NPP4 1024 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 EVLQ9UI08 416 aaPredicted RBP19.29■□□□□ 0.68
UBE3D-207ENST00000509102 XPO7Q9UIA9 1087 aaKnown RBP19.29■□□□□ 0.68
UBE3D-207ENST00000509102 CACNA1AO00555 2505 aa19.29■□□□□ 0.68
UBE3D-207ENST00000509102 F9P00740 461 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 HLA-EP13747 358 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 SOX5P35711 763 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 GABRB2P47870 512 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 PITX1P78337 314 aaPredicted RBP19.28■□□□□ 0.68
UBE3D-207ENST00000509102 EIF4EBP2Q13542 120 aaPredicted RBP19.28■□□□□ 0.68
UBE3D-207ENST00000509102 CAMK2GQ13555 558 aaPredicted RBP19.28■□□□□ 0.68
UBE3D-207ENST00000509102 SLC12A1Q13621 1099 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 TRIM61Q5EBN2 209 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 WDR45BQ5MNZ6 344 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 DAB2IPQ5VWQ8 1189 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 RGL4Q8IZJ4 473 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 HSPA12BQ96MM6 686 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 RPRD1AQ96P16 312 aaPredicted RBP19.28■□□□□ 0.68
UBE3D-207ENST00000509102 ITM2CQ9NQX7 267 aa19.28■□□□□ 0.68
UBE3D-207ENST00000509102 USP36Q9P275 1121 aaKnown RBP19.28■□□□□ 0.68
UBE3D-207ENST00000509102 A0A1B0GVM2 712 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 LNP1A1A4G5 178 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 TCAF2A6NFQ2 919 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 RNASEH1O60930 286 aaKnown RBP19.27■□□□□ 0.68
UBE3D-207ENST00000509102 CFIP05156 583 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 MMEP08473 750 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 ITPKAP23677 461 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 NNMTP40261 264 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 CSKP41240 450 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 KLK7P49862 253 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 SULT1E1P49888 294 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 TPMTP51580 245 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 ATXN3P54252 364 aaPredicted RBP19.27■□□□□ 0.68
UBE3D-207ENST00000509102 CDR2Q01850 454 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 SFSWAPQ12872 951 aaKnown RBP19.27■□□□□ 0.68
UBE3D-207ENST00000509102 DUOXA1Q1HG43 343 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 TTC31Q49AM3 519 aaPredicted RBP19.27■□□□□ 0.68
UBE3D-207ENST00000509102 PITRM1Q5JRX3 1037 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 BRMS1LQ5PSV4 323 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 ACBD5Q5T8D3 534 aaPredicted RBP19.27■□□□□ 0.68
UBE3D-207ENST00000509102 NAA35Q5VZE5 725 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 LRSAM1Q6UWE0 723 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 TRIM72Q6ZMU5 477 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 CACUL1Q86Y37 369 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 DEFB119Q8N690 84 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 AOPEPQ8N6M6 819 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 KDM1BQ8NB78 822 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 TTC17Q96AE7 1141 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 TOE1Q96GM8 510 aaKnown RBP19.27■□□□□ 0.68
UBE3D-207ENST00000509102 NUP58Q9BVL2 599 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 WDCPQ9H6R7 721 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 TMEM9BQ9NQ34 198 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 RXFP3Q9NSD7 469 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 SUSD2Q9UGT4 822 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 PILRBQ9UKJ0 227 aa19.27■□□□□ 0.68
UBE3D-207ENST00000509102 NUP205Q92621 2012 aa19.27■□□□□ 0.67
UBE3D-207ENST00000509102 SMTNL1A8MU46 457 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 MEI4A8MW99 385 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 DNTTP04053 509 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 SRPRAP08240 638 aaKnown RBP19.26■□□□□ 0.67
UBE3D-207ENST00000509102 CCDC172P0C7W6 258 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 GNSP15586 552 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 COPAP53621 1224 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 NOMO3P69849 1222 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 ZBTB16Q05516 673 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 DEUP1Q05D60 604 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 SULT2A1Q06520 285 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 PTPRNQ16849 979 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 XYLT1Q86Y38 959 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 CCAR2Q8N163 923 aaKnown RBP19.26■□□□□ 0.67
UBE3D-207ENST00000509102 CPA5Q8WXQ8 436 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 TMEM63CQ9P1W3 806 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 SIK3Q9Y2K2 1263 aa19.26■□□□□ 0.67
UBE3D-207ENST00000509102 ATXN2Q99700 1313 aaKnown RBP19.25■□□□□ 0.67
UBE3D-207ENST00000509102 LRRC10BA6NIK2 292 aa19.25■□□□□ 0.67
UBE3D-207ENST00000509102 PATE3B3GLJ2 98 aa19.25■□□□□ 0.67
UBE3D-207ENST00000509102 GOLGA8SH3BPF8 625 aa19.25■□□□□ 0.67
UBE3D-207ENST00000509102 ZNF18P17022 549 aa19.25■□□□□ 0.67
UBE3D-207ENST00000509102 JAM2P57087 298 aa19.25■□□□□ 0.67
UBE3D-207ENST00000509102 ECT2LQ008S8 904 aa19.25■□□□□ 0.67
UBE3D-207ENST00000509102 GFPT1Q06210 699 aaPredicted RBP19.25■□□□□ 0.67
UBE3D-207ENST00000509102 AUHQ13825 339 aaKnown RBP19.25■□□□□ 0.67
UBE3D-207ENST00000509102 SLC25A52Q3SY17 297 aa19.25■□□□□ 0.67
UBE3D-207ENST00000509102 ANO6Q4KMQ2 910 aa19.25■□□□□ 0.67
UBE3D-207ENST00000509102 PPM1JQ5JR12 505 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms