RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 ZYG11BQ9C0D3 744 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 DDX47Q9H0S4 455 aaKnown RBP15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 PRDM16Q9HAZ2 1276 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 ZNF510Q9Y2H8 683 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 HEY1Q9Y5J3 304 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 NUP210Q8TEM1 1887 aaPredicted RBP15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 E2F8A0AVK6 867 aa15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 TRDMT1O14717 391 aaKnown RBP15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 MFSD11O43934 449 aa15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 GBE1Q04446 702 aa15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 SNX1Q13596 522 aa15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 GPR153Q6NV75 609 aa15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 BBS7Q8IWZ6 715 aa15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 PRICKLE1Q96MT3 831 aaPredicted RBP15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 KRT12Q99456 494 aa15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 HOMER3Q9NSC5 361 aa15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 GDE1Q9NZC3 331 aa15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 SPTBN5Q9NRC6 3674 aaKnown RBP15.27■□□□□ 0.04
SNCAIP-211ENST00000509023 DRGXA6NNA5 263 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 CNTN5O94779 1100 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 MAP3K6O95382 1288 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 WEE1P30291 646 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 VCPP55072 806 aaKnown RBP15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 USP4Q13107 963 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 PAFAH1B3Q15102 231 aaKnown RBP15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 CCDC85BQ15834 202 aaPredicted RBP15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 ZNF77Q15935 545 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 CCNG2Q16589 344 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 ALFQ53S48 1182 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 CIR1Q86X95 450 aaPredicted RBP15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 NPWQ8N729 165 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 SMRP1Q8NCR6 262 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 ASB16Q96NS5 453 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 LRRC19Q9H756 370 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 KIF9Q9HAQ2 790 aa15.27■□□□□ 0.03
SNCAIP-211ENST00000509023 C5orf42Q9H799 3197 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 LIASO43766 372 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 TSPAN3O60637 253 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 TCF3P15923 654 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 RHOQP17081 205 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 CHRNA3P32297 505 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 MTHFRP42898 656 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 SGSHP51688 502 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 SLC10A2Q12908 348 aaPredicted RBP15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 NOMO1Q15155 1222 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 C5orf22Q49AR2 442 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 FAM78AQ5JUQ0 283 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 RABGAP1LQ5R372 815 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 TTC27Q6P3X3 843 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 CCDC137Q6PK04 289 aaKnown RBP15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 TFAP2DQ7Z6R9 452 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 NLRP14Q86W24 1093 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 FAM217AQ8IXS0 508 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 CFAP52Q8N1V2 620 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 MMGT1Q8N4V1 131 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 CELF5Q8N6W0 485 aaKnown RBP15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 RTL3Q8N8U3 475 aaKnown RBP15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 NETO2Q8NC67 525 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 DTLQ9NZJ0 730 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 DNPEPQ9ULA0 475 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 CDH7Q9ULB5 785 aa15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 ZFP37Q9Y6Q3 630 aaPredicted RBP15.26■□□□□ 0.03
SNCAIP-211ENST00000509023 EFCAB8A8MWE9 144 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 WASH4PA8MWX3 477 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 SERPINB6P35237 376 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 COILP38432 576 aaPredicted RBP15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 KCNJ1P48048 391 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 NR2C2P49116 596 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 FNTAP49354 379 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 RPS24P62847 133 aaKnown RBP15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 BYSLQ13895 437 aaKnown RBP15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 TEX35Q5T0J7 233 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 ZC3H18Q86VM9 953 aaKnown RBP15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 CCDC33Q8N5R6 958 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 SMARCD2Q92925 531 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 GUCD1Q96NT3 240 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 FRMD8P1Q9BZ68 369 aaPredicted RBP15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 POMKQ9H5K3 350 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 NDFIP2Q9NV92 336 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 TMEM248Q9NWD8 314 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 CD207Q9UJ71 328 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 DOCK4Q8N1I0 1966 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 H3BQ06 376 aaPredicted RBP15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 MCF2LO15068 1137 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 FOSL2P15408 326 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 CHKAP35790 457 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 VIPR2P41587 438 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 EIF3EP60228 445 aaKnown RBP15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 HABP4Q5JVS0 413 aaKnown RBP15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 DRICH1Q6PGQ1 229 aaPredicted RBP15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 TP53INP2Q8IXH6 220 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 CCDC105Q8IYK2 499 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 DEFB123Q8N688 67 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 SLC35B2Q8TB61 432 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 RSPRY1Q96DX4 576 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 MYADMQ96S97 322 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 AMACRQ9UHK6 382 aa15.25■□□□□ 0.03
SNCAIP-211ENST00000509023 GFRA2O00451 464 aa15.24■□□□□ 0.03
SNCAIP-211ENST00000509023 GBP2P32456 591 aaPredicted RBP15.24■□□□□ 0.03
SNCAIP-211ENST00000509023 MRPS25P82663 173 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms