RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 CD6P30203 668 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 SOX5P35711 763 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 GNL1P36915 607 aaPredicted RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 MATKP42679 507 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ABCG1P45844 678 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 PTK2Q05397 1052 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 C2orf54Q08AI8 447 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 DRAP1Q14919 205 aaPredicted RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 IFI16Q16666 785 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ARHGAP44Q17R89 818 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 HLA-BQ31612 363 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 MDH1BQ5I0G3 518 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 C6orf132Q5T0Z8 1188 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 HECTD3Q5T447 861 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 EGFLAMQ63HQ2 1017 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 GRAMD4Q6IC98 578 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 DPY19L2P1Q6NXN4 242 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 IL27RAQ6UWB1 636 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 KIAA1324Q6UXG2 1013 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 INTS8Q75QN2 995 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ZNF571Q7Z3V5 609 aaPredicted RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 LIMS2Q7Z4I7 341 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 IRF2BP2Q7Z5L9 587 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 TMEM25Q86YD3 366 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 MARCH9Q86YJ5 346 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 SLC9A9Q8IVB4 645 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 BBS7Q8IWZ6 715 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 SCUBE3Q8IX30 993 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 GALNT15Q8N3T1 639 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ZCCHC9Q8N567 271 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 XXYLT1Q8NBI6 393 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 NOA1Q8NC60 698 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 PDZD8Q8NEN9 1154 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 TAF4BQ92750 862 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 FBXO32Q969P5 355 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 HVCN1Q96D96 273 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 TOE1Q96GM8 510 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 HPDLQ96IR7 371 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 MRGPRX1Q96LB2 322 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 XPO6Q96QU8 1125 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 UBL7Q96S82 380 aaPredicted RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 OSBPL9Q96SU4 736 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ACOX2Q99424 681 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 PSMB7Q99436 277 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 CDC6Q99741 560 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 GABRG3Q99928 467 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 STRA6Q9BX79 667 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 STK33Q9BYT3 514 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 MIR1-1HGQ9H1L0 117 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 SLC6A17Q9H1V8 727 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 IL21RQ9HBE5 538 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 PDE11AQ9HCR9 933 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 CD248Q9HCU0 757 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 SIX2Q9NPC8 291 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 CD93Q9NPY3 652 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 TM7SF3Q9NS93 570 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 DNAJC17Q9NVM6 304 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 TOR4AQ9NXH8 423 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 CHORDC1Q9UHD1 332 aaPredicted RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 DNAJC12Q9UKB3 198 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 AJAP1Q9UKB5 411 aaPredicted RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 SNX12Q9UMY4 172 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 RAD54BQ9Y620 910 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 THADAQ6YHU6 1953 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ADAMTS20P59510 1910 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 CELSR3Q9NYQ7 3312 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 ATG2BQ96BY7 2078 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 FAM149AA5PLN7 773 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 PRRT4C9JH25 899 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 NEDD8-MDP1E9PL57 170 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 FLRT2O43155 660 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 DKK1O94907 266 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 RTN3O95197 1032 aaPredicted RBP6.35□□□□□ -1.39
SSBP2-211ENST00000509013 FTCDO95954 541 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 TNNC2P02585 160 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 H2AFZP0C0S5 128 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 ATXN1LP0C7T5 689 aaKnown RBP6.35□□□□□ -1.39
SSBP2-211ENST00000509013 IRF1P10914 325 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 GARTP22102 1010 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 CXCR5P32302 372 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 PRKCIP41743 596 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 TNNT3P45378 269 aaPredicted RBP6.35□□□□□ -1.39
SSBP2-211ENST00000509013 DNA2P51530 1060 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 CACNA2D1P54289 1103 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 JAM2P57087 298 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 SNRPFP62306 86 aaKnown RBP6.35□□□□□ -1.39
SSBP2-211ENST00000509013 VSNL1P62760 191 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 CAMK2BQ13554 666 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 SUZ12Q15022 739 aaKnown RBP6.35□□□□□ -1.39
SSBP2-211ENST00000509013 LONRF2Q1L5Z9 754 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 MAP9Q49MG5 647 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 CBWD6Q4V339 395 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 CBWD3Q5JTY5 395 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 CBWD5Q5RIA9 395 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 DCAF12L1Q5VU92 463 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 ALKBH5Q6P6C2 394 aaKnown RBP6.35□□□□□ -1.39
SSBP2-211ENST00000509013 TPGS1Q6ZTW0 290 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 H2AFVQ71UI9 128 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 HDXQ7Z353 690 aa6.35□□□□□ -1.39
SSBP2-211ENST00000509013 FMNL3Q8IVF7 1028 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms