RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 USP12O75317 370 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 HEXIM1O94992 359 aaKnown RBP7.91□□□□□ -1.14
CHD1-205ENST00000508756 SGPL1O95470 568 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 TGM2P21980 687 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 CYP3A7P24462 503 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 LIPMQ5VYY2 423 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 ERAP2Q6P179 960 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 DEF8Q6ZN54 512 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 FAM57BQ71RH2 274 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 ANKRD13BQ86YJ7 626 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 EXD3Q8N9H8 876 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 ADPRHL1Q8NDY3 354 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 TRAPPC9Q96Q05 1148 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 HTATIP2Q9BUP3 242 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 TMEM120AQ9BXJ8 343 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 SFXN1Q9H9B4 322 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 ERVK-5Q9HDB9 667 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 TMEM45AQ9NWC5 275 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 TNFRSF18Q9Y5U5 241 aa7.91□□□□□ -1.14
CHD1-205ENST00000508756 TCEA3O75764 348 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 CYP21A2P08686 494 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 RCAN1P53805 252 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 PGM5Q15124 567 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 RBMS2Q15434 407 aaKnown RBP7.9□□□□□ -1.14
CHD1-205ENST00000508756 PDCD2Q16342 344 aaPredicted RBP7.9□□□□□ -1.14
CHD1-205ENST00000508756 PXDC1Q5TGL8 231 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 KIAA1324Q6UXG2 1013 aaKnown RBP7.9□□□□□ -1.14
CHD1-205ENST00000508756 ADGRF4Q8IZF3 695 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 C16orf52Q8NHV5 167 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 BCAS4Q8TDM0 211 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 PIGOQ8TEQ8 1089 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 CPT1BQ92523 772 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 ELOVL5Q9NYP7 299 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 RIPOR2Q9Y4F9 1068 aa7.9□□□□□ -1.14
CHD1-205ENST00000508756 ZMYM2Q9UBW7 1377 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 hCG_1642624A0A1W2PR95 340 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 PPEF2O14830 753 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 UGDHO60701 494 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 NBNO60934 754 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 CNOT3O75175 753 aaKnown RBP7.89□□□□□ -1.15
CHD1-205ENST00000508756 MOSPD3O75425 235 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 FGBP02675 491 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 SERPINA4P29622 427 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 CDK7P50613 346 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 PRKAA2P54646 552 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 B4GALNT1Q00973 533 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 GRAMD1BQ3KR37 738 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 TMEM88Q6PEY1 159 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 OR52N4Q8NGI2 321 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 ATP2A3Q93084 1043 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 DDX23Q9BUQ8 820 aaKnown RBP7.89□□□□□ -1.15
CHD1-205ENST00000508756 ABHD16BQ9H3Z7 469 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 SRP68Q9UHB9 627 aaKnown RBP7.89□□□□□ -1.15
CHD1-205ENST00000508756 IPO11Q9UI26 975 aaKnown RBP7.89□□□□□ -1.15
CHD1-205ENST00000508756 KCND3Q9UK17 655 aa7.89□□□□□ -1.15
CHD1-205ENST00000508756 H0Y3Z8 333 aa7.88□□□□□ -1.15
CHD1-205ENST00000508756 PRF1P14222 555 aa7.88□□□□□ -1.15
CHD1-205ENST00000508756 POSTNQ15063 836 aa7.88□□□□□ -1.15
CHD1-205ENST00000508756 TBRG1Q3YBR2 411 aa7.88□□□□□ -1.15
CHD1-205ENST00000508756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.88□□□□□ -1.15
CHD1-205ENST00000508756 PIMREGQ9BSJ6 248 aa7.88□□□□□ -1.15
CHD1-205ENST00000508756 NDUFAF4Q9P032 175 aa7.88□□□□□ -1.15
CHD1-205ENST00000508756 RCE1Q9Y256 329 aa7.88□□□□□ -1.15
CHD1-205ENST00000508756 AFG3L2Q9Y4W6 797 aa7.88□□□□□ -1.15
CHD1-205ENST00000508756 ZNF521Q96K83 1311 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 PDCLQ13371 301 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 DGAT2L7PQ6IED9 249 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 SYNE3Q6ZMZ3 975 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 RTL10Q7L3V2 364 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 MDGA2Q7Z553 956 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 PIP4P1Q86T03 277 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 CSGALNACT1Q8TDX6 532 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 TRAPPC12Q8WVT3 735 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 PAGR1Q9BTK6 254 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 ARHGAP39Q9C0H5 1083 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 TAF1DQ9H5J8 278 aaPredicted RBP7.87□□□□□ -1.15
CHD1-205ENST00000508756 PAPOLBQ9NRJ5 636 aaKnown RBP7.87□□□□□ -1.15
CHD1-205ENST00000508756 HEY2Q9UBP5 337 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.87□□□□□ -1.15
CHD1-205ENST00000508756 LMTK3Q96Q04 1460 aa7.87□□□□□ -1.15
CHD1-205ENST00000508756 F8W810 466 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 LMO1P25800 156 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 CST5P28325 142 aaPredicted RBP7.86□□□□□ -1.15
CHD1-205ENST00000508756 PRKG1Q13976 671 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 MIDNQ504T8 468 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 ARL13AQ5H913 290 aaPredicted RBP7.86□□□□□ -1.15
CHD1-205ENST00000508756 KIAA1755Q5JYT7 1200 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 PAQR4Q8N4S7 273 aaPredicted RBP7.86□□□□□ -1.15
CHD1-205ENST00000508756 NRACQ8N912 160 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 FAM47BQ8NA70 645 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 SLC2A12Q8TD20 617 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 RUBCNQ92622 972 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 ADAD1Q96M93 576 aaKnown RBP7.86□□□□□ -1.15
CHD1-205ENST00000508756 FBXO4Q9UKT5 387 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 SLC8A2Q9UPR5 921 aa7.86□□□□□ -1.15
CHD1-205ENST00000508756 TTBK1Q5TCY1 1321 aaPredicted RBP7.85□□□□□ -1.15
CHD1-205ENST00000508756 GRM8O00222 908 aa7.85□□□□□ -1.15
CHD1-205ENST00000508756 WNT1P04628 370 aa7.85□□□□□ -1.15
CHD1-205ENST00000508756 GRK6P43250 576 aa7.85□□□□□ -1.15
CHD1-205ENST00000508756 MTX1Q13505 466 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms