RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PARD3BQ8TEW8 1205 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 PPM1EQ8WY54 764 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 LRRC46Q96FV0 321 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 RMI1Q9H9A7 625 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 DDX21Q9NR30 783 aaKnown RBP eCLIP4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 MYO6Q9UM54 1294 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 ICAM5Q9UMF0 924 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 VPS4AQ9UN37 437 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 INSL5Q9Y5Q6 135 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 SPATA31A5Q5VU36 1347 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 SPATA31A7Q8IWB4 1347 aa4.85□□□□□ -1.63
TRAPPC13-209ENST00000508304 CLEC18AA5D8T8 446 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 POM121BA6NF01 834 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 TTC34A8MYJ7 566 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 PMM2O15305 246 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 IFNA2P01563 188 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 MYL4P12829 197 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 AK2P54819 239 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 GALEQ14376 348 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 ACOX1Q15067 660 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 ANO1Q5XXA6 986 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 CYB5RLQ6IPT4 315 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 FAM186BQ8IYM0 893 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 SPICE1Q8N0Z3 855 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 CLEC18CQ8NCF0 446 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 TMEM174Q8WUU8 243 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 AKAP1Q92667 903 aaKnown RBP eCLIP4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 KAT2BQ92831 832 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 INPP5DQ92835 1189 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 MYD88Q99836 296 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 NLRC4Q9NPP4 1024 aa4.84□□□□□ -1.63
TRAPPC13-209ENST00000508304 CLCA1A8K7I4 914 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 HOXC6P09630 235 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 NDUFS1P28331 727 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 PIK3CBP42338 1070 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 ZNF543Q08ER8 600 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 CHAF1AQ13111 956 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 KCNJ12Q14500 433 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 MRNIPQ6NTE8 343 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 TMED8Q6PL24 325 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 SRLQ86TD4 932 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 SUN3Q8TAQ9 357 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 EIF3CQ99613 913 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 EIF2AQ9BY44 585 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 ZNF556Q9HAH1 456 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 PRDM16Q9HAZ2 1276 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 HIF1ANQ9NWT6 349 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 NCKIPSDQ9NZQ3 722 aa4.83□□□□□ -1.64
TRAPPC13-209ENST00000508304 KPNA5O15131 536 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 ZSCAN9O15535 394 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 WNT1P04628 370 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 MMP8P22894 467 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 BFSP2Q13515 415 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 LONRF1Q17RB8 773 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 WASHC2DQ5SRD0 308 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 KLHDC7AQ5VTJ3 777 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 ISM2Q6H9L7 571 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 CRTC1Q6UUV9 634 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 MYLK4Q86YV6 388 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 DDIASQ8IXT1 998 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 TRIM63Q969Q1 353 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 SLC39A13Q96H72 371 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 ZNF845Q96IR2 970 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 SNX27Q96L92 541 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 SCLT1Q96NL6 688 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 HTATIP2Q9BUP3 242 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 C6orf106Q9H6K1 298 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 AAMDCQ9H7C9 122 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 PLCB1Q9NQ66 1216 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 IPO11Q9UI26 975 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 UTS2RQ9UKP6 389 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 PHTF1Q9UMS5 762 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 PCDHB2Q9Y5E7 798 aa4.82□□□□□ -1.64
TRAPPC13-209ENST00000508304 EMSYQ7Z589 1322 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 A0A1B0GUV1 79 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 APOL1O14791 398 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 TCEA3O75764 348 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 DRD1P21728 446 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 FGFR2P21802 821 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 PBX1P40424 430 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 HTR3AP46098 478 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 GSTM5P46439 218 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 STT3AP46977 705 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 TLDC1Q6P9B6 456 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 TTC30AQ86WT1 665 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 RHPN2Q8IUC4 686 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 SMAP1Q8IYB5 467 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 ANKRD42Q8N9B4 389 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 ZFPM2Q8WW38 1151 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 GRAMD1AQ96CP6 724 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 COLEC11Q9BWP8 271 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 SEZ6LQ9BYH1 1024 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 TASP1Q9H6P5 420 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 PTPRHQ9HD43 1115 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 SIRT3Q9NTG7 399 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 PCDHGB1Q9Y5G3 927 aa4.81□□□□□ -1.64
TRAPPC13-209ENST00000508304 F5H423 210 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 MDM4O15151 490 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 CBFA2T3O75081 653 aa4.8□□□□□ -1.64
TRAPPC13-209ENST00000508304 SGPL1O95470 568 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms