RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 HMBSP08397 361 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 LCP1P13796 627 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 SNRPBP14678 240 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 PON1P27169 355 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 HOXD9P28356 352 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 HOXD12P35452 270 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 ANP32AP39687 249 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 ACADSBP45954 432 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 RGS7P49802 495 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 CREB5Q02930 508 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 NAA30Q147X3 362 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 GEN1Q17RS7 908 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 NUGGCQ68CJ6 796 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 KIAA1211LQ6NV74 962 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 SLC36A4Q6YBV0 504 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 GBP6Q6ZN66 633 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 LPCAT2Q7L5N7 544 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 KIAA0907Q7Z7F0 614 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 UNC45BQ8IWX7 931 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 IPO4Q8TEX9 1081 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 DDI1Q8WTU0 396 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 UCMAQ8WVF2 138 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 RLN3Q8WXF3 142 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 TMA16Q96EY4 203 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 CRACR2AQ9BSW2 395 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 TRIM62Q9BVG3 475 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 THAP9Q9H5L6 903 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 ZDHHC4Q9NPG8 344 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 TIMMDC1Q9NPL8 285 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 RXFP3Q9NSD7 469 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 ELOVL2Q9NXB9 296 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 BCCIPQ9P287 314 aaKnown RBP eCLIP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 APEX2Q9UBZ4 518 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 SEPT3Q9UH03 358 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 SFMBT1Q9UHJ3 866 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 EVLQ9UI08 416 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 CLEC4EQ9ULY5 219 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 INVSQ9Y283 1065 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 STON1Q9Y6Q2 735 aa8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 TNRC6BQ9UPQ9 1833 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-222ENST00000508238 BECN2A8MW95 431 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 KHNYNO15037 678 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 CALCAP01258 141 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 KRT5P13647 590 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 SLC9A1P19634 815 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 SLC11A2P49281 568 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 CCDC6Q16204 474 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 EXOC3L4Q17RC7 722 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 AASDHQ4L235 1098 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 STPG1Q5TH74 334 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 PEAR1Q5VY43 1037 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 TMEM215Q68D42 235 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 DPY19L2P1Q6NXN4 242 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 DENND1BQ6P3S1 775 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 ANKS1BQ7Z6G8 1248 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 SYT12Q8IV01 421 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 FAM114A1Q8IWE2 563 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 PGBD3Q8N328 593 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 FRMD1Q8N878 549 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 ZNF557Q8N988 423 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 WFIKKN2Q8TEU8 576 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 SHC3Q92529 594 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 GOLGA1Q92805 767 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 BHMTQ93088 406 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 COL26A1Q96A83 441 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 SLC39A13Q96H72 371 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 MRGPRX1Q96LB2 322 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 LSM14BQ9BX40 385 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 LHX5Q9H2C1 402 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 CACNA2D2Q9NY47 1150 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 CALCOCO1Q9P1Z2 691 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 PILRBQ9UKJ0 227 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 TLR6Q9Y2C9 796 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 USP24Q9UPU5 2620 aa8.27□□□□□ -1.09
UBE2D3-222ENST00000508238 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 IGHV1OR15-9A0A0B4J2B8 117 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 LNP1A1A4G5 178 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 WASH3PC4AMC7 463 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 PAPSS1O43252 624 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 AP5Z1O43299 807 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 MSI1O43347 362 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 ACSL4O60488 711 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 LETM1O95202 739 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 IGLV3-19P01714 112 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 GLI1P08151 1106 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 ADRB1P08588 477 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 NCAM1P13591 858 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 HLA-FP30511 346 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 GNA15P30679 374 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 IL12RB1P42701 662 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 WASP42768 502 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 PTGER3P43115 390 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 DHPSP49366 369 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 TBX4P57082 545 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 YWHAZP63104 245 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 IRX4P78413 519 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 EIF4EBP2Q13542 120 aaPredicted RBP8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 STARD3Q14849 445 aa8.26□□□□□ -1.09
UBE2D3-222ENST00000508238 MAN2A1Q16706 1144 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms