RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 LRIG2O94898 1065 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 LUC7L3O95232 432 aaKnown RBP20.69■□□□□ 0.9
USP53-203ENST00000507597 TNNT1P13805 278 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 RHOQP17081 205 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 IL1R2P27930 398 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 KCNT1Q5JUK3 1230 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 C6orf118Q5T5N4 469 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 GRAMD4Q6IC98 578 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 CARNMT1Q8N4J0 409 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 TTC8Q8TAM2 541 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 EDAQ92838 391 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 RBM41Q96IZ5 413 aaKnown RBP20.69■□□□□ 0.9
USP53-203ENST00000507597 NECAB3Q96P71 396 aaPredicted RBP20.69■□□□□ 0.9
USP53-203ENST00000507597 PEBP4Q96S96 227 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 PNKPQ96T60 521 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 ANLNQ9NQW6 1124 aa20.69■□□□□ 0.9
USP53-203ENST00000507597 DNAJC17Q9NVM6 304 aaKnown RBP20.69■□□□□ 0.9
USP53-203ENST00000507597 TRMT1Q9NXH9 659 aaKnown RBP20.69■□□□□ 0.9
USP53-203ENST00000507597 ZNF487B1APH4 448 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 NCAM2O15394 837 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 ZRANB2O95218 330 aaKnown RBP eCLIP20.68■□□□□ 0.9
USP53-203ENST00000507597 APODP05090 189 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 CTHP32929 405 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 ETFBP38117 255 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 MAPKAPK2P49137 400 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 DGKGP49619 791 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 TAS2R40P59535 323 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 RPS24P62847 133 aaKnown RBP20.68■□□□□ 0.9
USP53-203ENST00000507597 SIGLEC14Q08ET2 396 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 GRSF1Q12849 480 aaKnown RBP eCLIP20.68■□□□□ 0.9
USP53-203ENST00000507597 TPRG1Q6ZUI0 275 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 C14orf80Q86SX3 495 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 SETD3Q86TU7 594 aaPredicted RBP20.68■□□□□ 0.9
USP53-203ENST00000507597 REXO1L1PQ8IX06 675 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 RCOR2Q8IZ40 523 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 CCAR2Q8N163 923 aaKnown RBP20.68■□□□□ 0.9
USP53-203ENST00000507597 LRRC57Q8N9N7 239 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 FIBINQ8TAL6 211 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 WFIKKN2Q8TEU8 576 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 FAM3CQ92520 227 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 BHMTQ93088 406 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 P2RY13Q9BPV8 354 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 ZNF670Q9BS34 389 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 CD320Q9NPF0 282 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 TMPRSS4Q9NRS4 437 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 PLK2Q9NYY3 685 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 PCDHA3Q9Y5H8 950 aa20.68■□□□□ 0.9
USP53-203ENST00000507597 TIMM44O43615 452 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 DRD1P21728 446 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 CTNNA2P26232 953 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 HOXD9P28356 352 aaPredicted RBP20.67■□□□□ 0.9
USP53-203ENST00000507597 OR1E1P30953 314 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 CTNNA1P35221 906 aaKnown RBP20.67■□□□□ 0.9
USP53-203ENST00000507597 RWDD2BP57060 319 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 DMC1Q14565 340 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 MANEALQ5VSG8 457 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 DAB2IPQ5VWQ8 1189 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 ZNF783Q6ZMS7 281 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 NT5DC3Q86UY8 548 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 CFAP52Q8N1V2 620 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 LZTR1Q8N653 840 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 NAT16Q8N8M0 369 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 IGSF8Q969P0 613 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 PRICKLE1Q96MT3 831 aaPredicted RBP20.67■□□□□ 0.9
USP53-203ENST00000507597 KCTD15Q96SI1 283 aaPredicted RBP20.67■□□□□ 0.9
USP53-203ENST00000507597 CALN1Q9BXU9 219 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 KCND1Q9NSA2 647 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 GPATCH2LQ9NWQ4 482 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 FBXO10Q9UK96 956 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 CA14Q9ULX7 337 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 PYCARDQ9ULZ3 195 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 SLC27A6Q9Y2P4 619 aa20.67■□□□□ 0.9
USP53-203ENST00000507597 A0A0U1RQJ8 604 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 LRRD1A4D1F6 860 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 WASH4PA8MWX3 477 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 I6L893 689 aaPredicted RBP20.66■□□□□ 0.9
USP53-203ENST00000507597 STK25O00506 426 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 TULP3O75386 442 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 KRT1P04264 644 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 ZFXP17010 805 aaPredicted RBP20.66■□□□□ 0.9
USP53-203ENST00000507597 HOXC13P31276 330 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 SERPINB6P35237 376 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 GGCXP38435 758 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 GRIA2P42262 883 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 COPS2P61201 443 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 SEMA3BQ13214 749 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 FBXO43Q4G163 708 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 RFX8Q6ZV50 586 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 CYP4V2Q6ZWL3 525 aaPredicted RBP20.66■□□□□ 0.9
USP53-203ENST00000507597 ETFBKMTQ8IXQ9 262 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 KATNAL2Q8IYT4 538 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 ZNF683Q8IZ20 524 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 PYROXD2Q8N2H3 581 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 EXD1Q8NHP7 514 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 FAM71BQ8TC56 605 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.66■□□□□ 0.9
USP53-203ENST00000507597 UCMAQ8WVF2 138 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 ATRIPQ8WXE1 791 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 MFSD1Q9H3U5 465 aa20.66■□□□□ 0.9
USP53-203ENST00000507597 PCDH18Q9HCL0 1135 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms