RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 RASGRF2O14827 1237 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 MYO1DO94832 1006 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 PIGRP01833 764 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 TGM2P21980 687 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 RAD23BP54727 409 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 EPHB4P54760 987 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 COPS2P61201 443 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 ITPRIPL2Q3MIP1 535 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 TCEAL5Q5H9L2 206 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 TRAPPC5Q8IUR0 188 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 DQX1Q8TE96 717 aaKnown RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 SHC3Q92529 594 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 MAGEB10Q96LZ2 347 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 CD274Q9NZQ7 290 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 ZNHIT2Q9UHR6 403 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 TRMT6Q9UJA5 497 aaKnown RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 WDR91A4D1P6 747 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 CACNB4O00305 520 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 KCNJ1P48048 391 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 MARSP56192 900 aaKnown RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 MAPK7Q13164 816 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 ACAP1Q15027 740 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 UGT3A1Q6NUS8 523 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 RAD9BQ6WBX8 426 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 GLT6D1Q7Z4J2 308 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 BRD8Q9H0E9 1235 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 CPSF2Q9P2I0 782 aaKnown RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.67□□□□□ -0.86
NEK1-203ENST00000507142 SHOC2Q9UQ13 582 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 ZFP37Q9Y6Q3 630 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 A0A0A6YYK5 440 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 CCDC151A5D8V7 595 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 TTI1O43156 1089 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 HAPLN1P10915 354 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 MZF1P28698 734 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 DHX34Q14147 1143 aaKnown RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 COBLL1Q53SF7 1204 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 EOGTQ5NDL2 527 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 SPATA20Q8TB22 786 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 DNAJC7Q99615 494 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 GTSE1Q9NYZ3 720 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 KIAA0355O15063 1070 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 STBD1O95210 358 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 PTCRAQ6ISU1 281 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 SYDE1Q6ZW31 735 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 PTAR1Q7Z6K3 402 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 TRIM42Q8IWZ5 723 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 PAK6Q9NQU5 681 aaPredicted RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 SENP1Q9P0U3 644 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 TDRKHQ9Y2W6 561 aaKnown RBP9.67□□□□□ -0.86
NEK1-203ENST00000507142 PAPPAQ13219 1627 aa9.67□□□□□ -0.86
NEK1-203ENST00000507142 FAM237AA0A1B0GTK4 181 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 MBLAC1A4D2B0 266 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 ERBB2P04626 1255 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 EPCAMP16422 314 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 UPP1Q16831 310 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 MMEL1Q495T6 779 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 SLC4A11Q8NBS3 891 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 MIOSQ9NXC5 875 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 CHMP2BQ9UQN3 213 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 DDX60Q8IY21 1712 aaKnown RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 TBX18O95935 607 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 CLLU1OSQ5K130 101 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 EXD1Q8NHP7 514 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 GLMNQ92990 594 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 FAM136AQ96C01 138 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 ABCB8Q9NUT2 735 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 FAM153AQ9UHL3 310 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 G3BP2Q9UN86 482 aaKnown RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 IGKV6D-21A0A0A0MT36 114 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 HSPA4LO95757 839 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 PRNPP04156 253 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 CNPP09543 421 aaKnown RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 PRKCQQ04759 706 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 CAMK2GQ13555 558 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 TMEM240Q5SV17 173 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 TTC39BQ5VTQ0 682 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 VITQ6UXI7 678 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 C11orf96Q7Z7L8 435 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 THEGQ9P2T0 379 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 NDOR1Q9UHB4 597 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 AGO1Q9UL18 857 aaKnown RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 KIAA0100Q14667 2235 aaKnown RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 MAN2B1O00754 1011 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 TGM5O43548 720 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 EIF3BP55884 814 aaKnown RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 NCAPHQ15003 741 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 TRIP4Q15650 581 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 SLC25A52Q3SY17 297 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 SLC13A5Q86YT5 568 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 ARID3BQ8IVW6 561 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 ATG4AQ8WYN0 398 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 FEM1CQ96JP0 617 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 PNKPQ96T60 521 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 MLPHQ9BV36 600 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 SNRNP25Q9BV90 132 aaKnown RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 ERVW-1Q9UQF0 538 aa9.66□□□□□ -0.86
NEK1-203ENST00000507142 A0A087WUV0 522 aaPredicted RBP9.66□□□□□ -0.86
NEK1-203ENST00000507142 KANSL1LA0AUZ9 987 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms