RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 MTM1Q13496 603 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 NIPAL1Q6NVV3 410 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 ZNF354CQ86Y25 554 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 TAB3Q8N5C8 712 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 ARFGAP1Q8N6T3 406 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 CNTD1Q8N815 330 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 BHLHE22Q8NFJ8 381 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 CDRT15Q96T59 188 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 NAT9Q9BTE0 207 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 KIFC3Q9BVG8 833 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 COG4Q9H9E3 785 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 EFCAB1Q9HAE3 211 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 INIPQ9NRY2 104 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 GGA3Q9NZ52 723 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 PCDHGB4Q9UN71 923 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 PCDHGB5Q9Y5G0 923 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 FUOMA2VDF0 154 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 HTR3EA5X5Y0 456 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 TCP10L2B9ZVM9 353 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 BOLA2-SMG1P6H3BVE0 249 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 FBP2O00757 339 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 ZBTB14O43829 449 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 ASS1P00966 412 aaKnown RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 OCM2P0CE71 109 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 OCMP0CE72 109 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 MCF2P10911 925 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 THOP1P52888 689 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 PDK2Q15119 407 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 CYTH1Q15438 398 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 MGAT5BQ3V5L5 792 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 KCNT1Q5JUK3 1230 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 PRAMEF18Q5VWM3 479 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 ELMSAN1Q6PJG2 1045 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 COLGALT2Q8IYK4 626 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 MTMR14Q8NCE2 650 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 DOK1Q99704 481 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 EFHD1Q9BUP0 239 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 CALN1Q9BXU9 219 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 EIF2AQ9BY44 585 aaKnown RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 ZNF70Q9UC06 446 aaPredicted RBP16.28■□□□□ 0.2
SCLT1-208ENST00000506368 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 B3GNT3Q9Y2A9 372 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 TMX2Q9Y320 296 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 RNF11Q9Y3C5 154 aa16.28■□□□□ 0.2
SCLT1-208ENST00000506368 ZNF487B1APH4 448 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 KCNA4P22459 653 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 HALP42357 657 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 BCAP31P51572 246 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 PPIL2Q13356 520 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 PDE1CQ14123 709 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-208ENST00000506368 TTC30AQ86WT1 665 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 C10orf107Q8IVU9 208 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 CDKL3Q8IVW4 592 aaPredicted RBP16.27■□□□□ 0.2
SCLT1-208ENST00000506368 CDAN1Q8IWY9 1227 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 ZFPM1Q8IX07 1006 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 GALNT4Q8N4A0 578 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 WDTC1Q8N5D0 677 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 PACRGLQ8N7B6 248 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 BSNDQ8WZ55 320 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 ISOC1Q96CN7 298 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 ASB9Q96DX5 294 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 CNDP2Q96KP4 475 aaKnown RBP16.27■□□□□ 0.2
SCLT1-208ENST00000506368 UTP6Q9NYH9 597 aaKnown RBP16.27■□□□□ 0.2
SCLT1-208ENST00000506368 TMEM9Q9P0T7 183 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 SUCOQ9UBS9 1254 aaKnown RBP16.27■□□□□ 0.2
SCLT1-208ENST00000506368 ADAM28Q9UKQ2 775 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 ZBTB21Q9ULJ3 1066 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 USP18Q9UMW8 372 aa16.27■□□□□ 0.2
SCLT1-208ENST00000506368 TDRKHQ9Y2W6 561 aaKnown RBP16.27■□□□□ 0.2
SCLT1-208ENST00000506368 TRIM38O00635 465 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 AIM2O14862 343 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 KCNN4O15554 427 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 TBC1D12O60347 775 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 UGT1A9O60656 530 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 HSPA4LO95757 839 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 APRTP07741 180 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 ZNF24P17028 368 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 XRCC1P18887 633 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-208ENST00000506368 NIPAL4Q0D2K0 466 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 TCP10Q12799 353 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 IKBKEQ14164 716 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 GK3PQ14409 553 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 PPP2R5DQ14738 602 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 TGFBIQ15582 683 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 BCL2A1Q16548 175 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 MAP1SQ66K74 1059 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-208ENST00000506368 USP50Q70EL3 339 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-208ENST00000506368 SCAIQ8N9R8 606 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 CHPT1Q8WUD6 406 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 ISL2Q96A47 359 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 THAP11Q96EK4 314 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 UHRF1Q96T88 793 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-208ENST00000506368 SHCBP1LQ9BZQ2 653 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 UGT1A7Q9HAW7 530 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 UGT1A10Q9HAW8 530 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 UGT1A8Q9HAW9 530 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 C8orf4Q9NR00 106 aa16.26■□□□□ 0.19
SCLT1-208ENST00000506368 SCHIP1Q9P0W5 487 aaPredicted RBP16.26■□□□□ 0.19
SCLT1-208ENST00000506368 ACOT8O14734 319 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms