RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 PBX3P40426 434 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 KPNA1P52294 538 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 GYS2P54840 703 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 MLLT6P55198 1093 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 TBX4P57082 545 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 WDR5P61964 334 aaKnown RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 USP46P62068 366 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 SARNPP82979 210 aaKnown RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 TAF10Q12962 218 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 DUSP4Q13115 394 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 AUHQ13825 339 aaKnown RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 BTG3Q14201 252 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 PRKD1Q15139 912 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 TRIP4Q15650 581 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 PARP6Q2NL67 630 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 TNFAIP8L3Q5GJ75 292 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 ANKRD20A2Q5SQ80 823 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 FAM72AQ5TYM5 149 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 ANKRD20A1Q5TYW2 823 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 MANEALQ5VSG8 457 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 ANKRD20A3Q5VUR7 823 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 ANKRD22Q5VYY1 191 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 KCTD16Q68DU8 428 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 FAM72DQ6L9T8 149 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 ARHGEF18Q6ZSZ5 1173 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 B4GALNT4Q76KP1 1039 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 FAM72BQ86X60 149 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 LRRC49Q8IUZ0 686 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 VPS52Q8N1B4 723 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 RIBC1Q8N443 379 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 TTC9BQ8N6N2 239 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 ATP6V0D2Q8N8Y2 350 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 COLGALT1Q8NBJ5 622 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 PDZD8Q8NEN9 1154 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 ZNF461Q8TAF7 563 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 PYROXD1Q8WU10 500 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 TBC1D31Q96DN5 1066 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 C9orf72Q96LT7 481 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 VAT1Q99536 393 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 SEPT5Q99719 369 aaPredicted RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 VN1R3Q9BXE9 311 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 CENPHQ9H3R5 247 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 PRDM12Q9H4Q4 367 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 ETNK1Q9HBU6 452 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 RAB6BQ9NRW1 208 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 DNAJC17Q9NVM6 304 aaKnown RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 DONSONQ9NYP3 566 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 FNIP2Q9P278 1114 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 BCCIPQ9P287 314 aaKnown RBP eCLIP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 SFMBT1Q9UHJ3 866 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 NOVA2Q9UNW9 492 aaKnown RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 SSX2IPQ9Y2D8 614 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 SLC27A5Q9Y2P5 690 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 MFHAS1Q9Y4C4 1052 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 CDY1Q9Y6F8 540 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 DOCK4Q8N1I0 1966 aa8.29□□□□□ -1.08
COL4A5-208ENST00000505728 PRRC2BQ5JSZ5 2229 aaKnown RBP8.29□□□□□ -1.08
COL4A5-208ENST00000505728 TCRBV7S3A2A0A539 114 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 ADAM12O43184 909 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 PAGE1O75459 146 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 SPAG6O75602 509 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 TMEM63AO94886 807 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 MAP3K6O95382 1288 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 APOEP02649 317 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 CSH1P0DML2 217 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 CSH2P0DML3 217 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 MLNP12872 115 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 VAV1P15498 845 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 PGFP49763 221 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 DEFB103AP81534 67 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 RING1Q06587 406 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 PPIDQ08752 370 aaKnown RBP8.28□□□□□ -1.08
COL4A5-208ENST00000505728 GALNT2Q10471 571 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 AP1B1Q10567 949 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 SEMA5AQ13591 1074 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 RAB33AQ14088 237 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 ADGRE1Q14246 886 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 RASA2Q15283 850 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 BBS9Q3SYG4 887 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 CCDC38Q502W7 563 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 DNAJC21Q5F1R6 531 aaKnown RBP8.28□□□□□ -1.08
COL4A5-208ENST00000505728 FNBP1LQ5T0N5 605 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 SNX30Q5VWJ9 437 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 TDRPQ86YL5 185 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 PALM2Q8IXS6 379 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 ZBED8Q8IZ13 594 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 ATP11CQ8NB49 1132 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 CCNYQ8ND76 341 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 UHMK1Q8TAS1 419 aaKnown RBP8.28□□□□□ -1.08
COL4A5-208ENST00000505728 CCDC110Q8TBZ0 833 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 HERVK_113Q902F9 699 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 HDAC11Q96DB2 347 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 LRRC39Q96DD0 335 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 P2RY11Q96G91 374 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 FCRL2Q96LA5 508 aaPredicted RBP8.28□□□□□ -1.08
COL4A5-208ENST00000505728 TSGA13Q96PP4 275 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 CLSTN3Q9BQT9 956 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 SIK2Q9H0K1 926 aa8.28□□□□□ -1.08
COL4A5-208ENST00000505728 CRISPLD1Q9H336 500 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms