RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 COX11Q9Y6N1 276 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 SLIT3O75094 1523 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 KDM3BQ7LBC6 1761 aa4.45□□□□□ -1.7
RFC1-208ENST00000504849 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 ABCC12Q96J65 1359 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 HEG1Q9ULI3 1381 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 ZNF839A8K0R7 811 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CAPN14A8MX76 684 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 B4DLN1 442 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 PYCARD-AS1I3L0S3 204 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 F2RL2O00254 374 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 PIP5K1BO14986 540 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 ASNA1O43681 348 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 INMTO95050 263 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 FSBPO95073 299 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 RTN3O95197 1032 aaPredicted RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 NDST3O95803 873 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 ABHD16AO95870 558 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 TK1P04183 234 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 HSPD1P10809 573 aaKnown RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 IL1R1P14778 569 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 NPPBP16860 134 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 EGR1P18146 543 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 IL15P40933 162 aaPredicted RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 KCNJ5P48544 419 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 PIK3CGP48736 1102 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 METAP2P50579 478 aaKnown RBP eCLIP4.44□□□□□ -1.7
RFC1-208ENST00000504849 PLCD1P51178 756 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CASP6P55212 293 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 PER3P56645 1201 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CTXN1P60606 82 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 ACTR2P61160 394 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 ZBED6P86452 979 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 SPAG1Q07617 926 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 TFCP2Q12800 502 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 AIMP1Q12904 312 aaKnown RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 DLGAP5Q15398 846 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 STILQ15468 1287 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 MAPKAPK3Q16644 382 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 RABL6Q3YEC7 729 aaPredicted RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 DNAJC21Q5F1R6 531 aaKnown RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 ZMAT1Q5H9K5 638 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CFAP58Q5T655 872 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 MFSD4BQ5TF39 518 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 RESP18Q5W5W9 173 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 LMBRD2Q68DH5 695 aaPredicted RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 CCDC129Q6ZRS4 1044 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 STOX1Q6ZVD7 989 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 Q6ZVL8 140 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 BBS12Q6ZW61 710 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 KRT74Q7RTS7 529 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CCDC91Q7Z6B0 441 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CCDC117Q8IWD4 279 aaPredicted RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 YAF2Q8IY57 180 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 UNC5BQ8IZJ1 945 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CNPY4Q8N129 248 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CELF5Q8N6W0 485 aaKnown RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 OR7D4Q8NG98 312 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 AFAP1L1Q8TED9 768 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CASKIN2Q8WXE0 1202 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 DHX58Q96C10 678 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 HVCN1Q96D96 273 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 LRRC46Q96FV0 321 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 PRPF18Q99633 342 aaKnown RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 SOX7Q9BT81 388 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 LRRC2Q9BYS8 371 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 TWSG1Q9GZX9 223 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CHST8Q9H2A9 424 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 MSL2Q9HCI7 577 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 LANCL2Q9NS86 450 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 POLR3BQ9NW08 1133 aaPredicted RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 ARHGAP20Q9P2F6 1191 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 PI4KBQ9UBF8 816 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 NFE2L3Q9Y4A8 694 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CTDP1Q9Y5B0 961 aaPredicted RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 PIK3C2AO00443 1686 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 XIRP1Q702N8 1843 aaKnown RBP4.44□□□□□ -1.7
RFC1-208ENST00000504849 MAST3O60307 1309 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 ZMYM6O95789 1325 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 WDR17Q8IZU2 1322 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 STK36Q9NRP7 1315 aa4.44□□□□□ -1.7
RFC1-208ENST00000504849 CPDO75976 1380 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 LMO7Q8WWI1 1683 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 A0A087WUV0 522 aaPredicted RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 TARSL2A2RTX5 802 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 PABPN1LA6NDY0 278 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 HMX3A6NHT5 357 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ZNF213O14771 459 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 DKC1O60832 514 aaKnown RBP eCLIP4.43□□□□□ -1.7
RFC1-208ENST00000504849 GPR32O75388 356 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 CIAO1O76071 339 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ACTL6BO94805 426 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 LY86O95711 162 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 BMP15O95972 392 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 ANXA1P04083 346 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 A1BGP04217 495 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 AMY1AP04745 511 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 TXNP10599 105 aaKnown RBP4.43□□□□□ -1.7
RFC1-208ENST00000504849 RARBP10826 455 aa4.43□□□□□ -1.7
RFC1-208ENST00000504849 DDCP20711 480 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms