RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 TSPAN3O60637 253 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 SEMA4FO95754 770 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 HLA-DRAP01903 254 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 DNTTP04053 509 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 PRB1P04280 392 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 PDIA4P13667 645 aaKnown RBP9.47□□□□□ -0.89
DHFR-202ENST00000504396 ACSL1P33121 698 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 KIF11P52732 1056 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 C21orf59P57076 290 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 C19orf57Q0VDD7 668 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 ZACNQ401N2 412 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 TTC31Q49AM3 519 aaPredicted RBP9.47□□□□□ -0.89
DHFR-202ENST00000504396 ZNF394Q53GI3 561 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 CCDC186Q7Z3E2 898 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 SCD5Q86SK9 330 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 OR2T3Q8NH03 318 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 CYB5D2Q8WUJ1 264 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 P2RY11Q96G91 374 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 ARID3AQ99856 593 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 SLC2A11Q9BYW1 496 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 BTBD1Q9H0C5 482 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 TM9SF3Q9HD45 589 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 EXOC1Q9NV70 894 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 CLEC4EQ9ULY5 219 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 PLA2G4CQ9UP65 541 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 MTMR6Q9Y217 621 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 FRMD4BQ9Y2L6 1034 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.47□□□□□ -0.89
DHFR-202ENST00000504396 SLCO1B1Q9Y6L6 691 aa9.47□□□□□ -0.89
DHFR-202ENST00000504396 ACACAQ13085 2346 aa9.46□□□□□ -0.89
DHFR-202ENST00000504396 ITPR1Q14643 2758 aa9.46□□□□□ -0.89
DHFR-202ENST00000504396 H0Y8X5 98 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 PLK4O00444 970 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 TIMM44O43615 452 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 LZTS3O60299 673 aaPredicted RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 ASS1P00966 412 aaKnown RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 NR3C1P04150 777 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 HNF1BP35680 557 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 GRIA4P48058 902 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 BCAT1P54687 386 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 SLC8A3P57103 927 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 SEMG2Q02383 582 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 PDE4CQ08493 712 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 INCA1Q0VD86 236 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 CUL4BQ13620 913 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 FOXD4L6Q3SYB3 417 aaPredicted RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 SHC4Q6S5L8 630 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 FOXD4L3Q6VB84 417 aaPredicted RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 DBX2Q6ZNG2 339 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 LRRC69Q6ZNQ3 347 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 GRAMD1CQ8IYS0 662 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 CEP57L1Q8IYX8 460 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 ARHGAP18Q8N392 663 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 FOXD4L4Q8WXT5 416 aaPredicted RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 IGSF8Q969P0 613 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 GTPBP3Q969Y2 492 aaKnown RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 BIRC7Q96CA5 298 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 NXPE2Q96DL1 559 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 FAXDC2Q96IV6 333 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 PIWIL1Q96J94 861 aaKnown RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 HEXIM2Q96MH2 286 aaKnown RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 UBL7Q96S82 380 aaPredicted RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 ACE2Q9BYF1 805 aaPredicted RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 BACH2Q9BYV9 841 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 CYP3A43Q9HB55 503 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 OSGEPQ9NPF4 335 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 DMAC2Q9NW81 257 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 FAM13BQ9NYF5 915 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 AK5Q9Y6K8 562 aa9.46□□□□□ -0.9
DHFR-202ENST00000504396 TP53BP1Q12888 1972 aaPredicted RBP9.46□□□□□ -0.9
DHFR-202ENST00000504396 A0A087WV48 116 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 PDXKO00764 312 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 MAPK13O15264 365 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 DKK1O94907 266 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 TRIM49P0CI25 452 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 TRIM49CP0CI26 452 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 JUPP14923 745 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 ABCB4P21439 1286 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 CD27P26842 260 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 HARS2P49590 506 aaKnown RBP9.45□□□□□ -0.9
DHFR-202ENST00000504396 CLDN6P56747 220 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 ZNF445P59923 1031 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 YWHAGP61981 247 aaKnown RBP eCLIP9.45□□□□□ -0.9
DHFR-202ENST00000504396 ENPEPQ07075 957 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 SMAD1Q15797 465 aaKnown RBP9.45□□□□□ -0.9
DHFR-202ENST00000504396 MPPE1Q53F39 396 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 TMEM215Q68D42 235 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 CHST9Q7L1S5 443 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 GATAD2AQ86YP4 633 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 CPXM2Q8N436 756 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 TTC39CQ8N584 583 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 GLMNQ92990 594 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 PLD4Q96BZ4 506 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 DUSP16Q9BY84 665 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 NIF3L1Q9GZT8 377 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 FBRSQ9HAH7 460 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 ABCB8Q9NUT2 735 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 NCKAP1Q9Y2A7 1128 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 USP3Q9Y6I4 520 aa9.45□□□□□ -0.9
DHFR-202ENST00000504396 MUC22E2RYF6 1773 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms