RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SLC20A2Q08357 652 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 RSPO2Q6UXX9 243 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 SLC39A5Q6ZMH5 540 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 PRPF39Q86UA1 669 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 TMEM173Q86WV6 379 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 MPP5Q8N3R9 675 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 PDCD7Q8N8D1 485 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 CKAP2Q8WWK9 683 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 GGA2Q9UJY4 613 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 VNN2O95498 520 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 PRKCHP24723 683 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 GPR17Q13304 367 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 RTP2Q5QGT7 225 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 LRRC8BQ6P9F7 803 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 ARHGAP18Q8N392 663 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 DENND1AQ8TEH3 1009 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 SGSM3Q96HU1 749 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 SERPINB11Q96P15 392 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 SMC6Q96SB8 1091 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 SSU72Q9NP77 194 aaKnown RBP21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 NKIRAS1Q9NYS0 192 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 NUDT5Q9UKK9 219 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 SMG5Q9UPR3 1016 aaKnown RBP21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 MICAL3Q7RTP6 2002 aa21.93■■□□□ 1.1
UBE2D3-216ENST00000503742 MTMR11A4FU01 709 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 NT5C1B-RDH14C9J2C7 533 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 MTSS1O43312 755 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 CPP00450 1065 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 UNC5AQ6ZN44 842 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 PID1Q7Z2X4 250 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 CPLX4Q7Z7G2 160 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 LRRC34Q8IZ02 419 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 DYDC1Q8WWB3 177 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 SIK2Q9H0K1 926 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 GREB1Q4ZG55 1949 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 F5H423 210 aaPredicted RBP21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 TYROBPO43914 113 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 SPAG7O75391 227 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 APOEP02649 317 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 SRGAP2BP0DMP2 458 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 PBX3P40426 434 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 NRG1Q02297 640 aaPredicted RBP21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 ZNF33AQ06730 810 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 SMARCB1Q12824 385 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 SPATS2Q86XZ4 545 aaKnown RBP21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 C4orf33Q8N1A6 199 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 SPPL2BQ8TCT7 592 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 BCL7CQ8WUZ0 217 aaPredicted RBP21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 SLC39A13Q96H72 371 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 FCRL2Q96LA5 508 aaPredicted RBP21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 TOX2Q96NM4 488 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 GORASP1Q9BQQ3 440 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 MLXIPLQ9NP71 852 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 GMIPQ9P107 970 aa21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 KLHL8Q9P2G9 620 aaPredicted RBP21.92■■□□□ 1.1
UBE2D3-216ENST00000503742 H7C4K7 107 aa21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 EFEMP2O95967 443 aa21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 WDR4P57081 412 aaKnown RBP21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 TAS1R1Q7RTX1 841 aa21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 LRRC43Q8N309 656 aa21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 ZSCAN18Q8TBC5 510 aaPredicted RBP21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 DEPDC1BQ8WUY9 529 aa21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 OXCT2Q9BYC2 517 aaPredicted RBP21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 PPP1R12CQ9BZL4 782 aa21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 CRISPLD1Q9H336 500 aa21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 TLR6Q9Y2C9 796 aa21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 PCDHA11Q9Y5I1 949 aa21.91■■□□□ 1.1
UBE2D3-216ENST00000503742 FGF10O15520 208 aaPredicted RBP21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 CPB1P15086 417 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 ARPP19P56211 112 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 RWDD4Q6NW29 188 aaKnown RBP21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 RNF19BQ6ZMZ0 732 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 ANKS3Q6ZW76 656 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 GSDMBQ8TAX9 411 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 TBC1D31Q96DN5 1066 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 SPATA17Q96L03 361 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 VAT1Q99536 393 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 TTPALQ9BTX7 342 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 TRHDEQ9UKU6 1024 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 MAD1L1Q9Y6D9 718 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 SHROOM3Q8TF72 1996 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 RTN3O95197 1032 aaPredicted RBP21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 ASMTLO95671 621 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 YWHAQP27348 245 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 CD68P34810 354 aaPredicted RBP21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 TLE2Q04725 743 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 TEX44Q53QW1 395 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 STEAP4Q687X5 459 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 CYS1Q717R9 158 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 ARHGAP12Q8IWW6 846 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 SEC16BQ96JE7 1060 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 C1orf74Q96LT6 269 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 CLIC5Q9NZA1 410 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 SLC27A5Q9Y2P5 690 aa21.9■■□□□ 1.1
UBE2D3-216ENST00000503742 IQANK1A0A1B0GTG1 560 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 SDR42E2A6NKP2 422 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 SOAT2O75908 522 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 INHBAP08476 426 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 HAPLN1P10915 354 aaPredicted RBP21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 KRT4P19013 534 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms