RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 LRRC37A2A6NM11 1700 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 HBP1O60381 514 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 ZMPSTE24O75844 475 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 GP5P40197 560 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 PDCD2Q16342 344 aaPredicted RBP25.12■■□□□ 1.61
DDX41-202ENST00000503078 EPGNQ6UW88 154 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 RTKNQ9BST9 563 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 ZNF358Q9NW07 568 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 SSX2IPQ9Y2D8 614 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 ZBTB14O43829 449 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 SLC26A2P50443 739 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 CHN2P52757 468 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 KLF10Q13118 480 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 SLC5A9Q2M3M2 681 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 BSPRYQ5W0U4 402 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 CCDC185Q8N715 623 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 NAT14Q8WUY8 206 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 SPATA33Q96N06 139 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 ZCWPW1Q9H0M4 648 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 CDH19Q9H159 772 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 SYBUQ9NX95 663 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 GGA3Q9NZ52 723 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 EVPLQ92817 2033 aa25.12■■□□□ 1.61
DDX41-202ENST00000503078 ERVK-10P10266 1014 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 GOT1P17174 413 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 GMPRP36959 345 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 USP4Q13107 963 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 LSAMPQ13449 338 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 LAMB3Q13751 1172 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 SMAD1Q15797 465 aaKnown RBP25.11■■□□□ 1.61
DDX41-202ENST00000503078 KYAT1Q16773 422 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 GRAMD1BQ3KR37 738 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 OGFRL1Q5TC84 451 aaPredicted RBP25.11■■□□□ 1.61
DDX41-202ENST00000503078 UGT2A3Q6UWM9 527 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 MRPL45Q9BRJ2 306 aaKnown RBP25.11■■□□□ 1.61
DDX41-202ENST00000503078 SMARCAD1Q9H4L7 1026 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 SNX15Q9NRS6 342 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 USP3Q9Y6I4 520 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 TXNDC9O14530 226 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 AP1G1O43747 822 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 CCDC130P13994 396 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 FOLH1Q04609 750 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 SH3D19Q5HYK7 790 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 GRTP1Q5TC63 336 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 FBXL19Q6PCT2 694 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 CLEC4CQ8WTT0 213 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 CPNE1Q99829 537 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 SRCAPQ6ZRS2 3230 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 PTPRFP10586 1907 aa25.11■■□□□ 1.61
DDX41-202ENST00000503078 A0A087WZ62 844 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 SMIM31A0A1B0GVY4 71 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 STK10O94804 968 aaKnown RBP25.1■■□□□ 1.61
DDX41-202ENST00000503078 POLBP06746 335 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 ETS2P15036 469 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 SH3BGRP55822 239 aaPredicted RBP25.1■■□□□ 1.61
DDX41-202ENST00000503078 POU5F1BQ06416 359 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 METTL21CQ5VZV1 264 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 SLC26A9Q7LBE3 791 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 CMC1Q7Z7K0 106 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 ZNF781Q8N8C0 355 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 DTNBP1Q96EV8 351 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 CERS2Q96G23 380 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 NDNQ99608 321 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 FDXACB1Q9BRP7 624 aaPredicted RBP25.1■■□□□ 1.61
DDX41-202ENST00000503078 OXCT2Q9BYC2 517 aaPredicted RBP25.1■■□□□ 1.61
DDX41-202ENST00000503078 MAN1C1Q9NR34 630 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 E2F8A0AVK6 867 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 E9PBE3 544 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 RNF103O00237 685 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 KLHL41O60662 606 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 C22orf31O95567 290 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 HSPA4LO95757 839 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 ARF4P18085 180 aaPredicted RBP25.1■■□□□ 1.61
DDX41-202ENST00000503078 MAGEA12P43365 314 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 TREML2Q5T2D2 321 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 ISL2Q96A47 359 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 PPP1R16BQ96T49 567 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 INPP5FQ9Y2H2 1132 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 DTNAQ9Y4J8 743 aa25.1■■□□□ 1.61
DDX41-202ENST00000503078 MYO18AQ92614 2054 aaKnown RBP25.1■■□□□ 1.61
DDX41-202ENST00000503078 ARL4AP40617 200 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 MLH1P40692 756 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 ALDH1A3P47895 512 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 SLC9B1Q4ZJI4 515 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 TNS4Q8IZW8 715 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 PYROXD2Q8N2H3 581 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 DCLK2Q8N568 766 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 NDUFA13Q9P0J0 144 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 ADAM28Q9UKQ2 775 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 RPS6KL1Q9Y6S9 549 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.09■■□□□ 1.61
DDX41-202ENST00000503078 SPANXN3Q5MJ09 141 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 CES3Q6UWW8 571 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 NT5DC4Q86YG4 428 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 PGBD4Q96DM1 585 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 KIF12Q96FN5 646 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 P2RY11Q96G91 374 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 EPAS1Q99814 870 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 SPATC1LQ9H0A9 340 aa25.09■■□□□ 1.61
DDX41-202ENST00000503078 EPB41L1Q9H4G0 881 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms