RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 BRD3Q15059 726 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 DLGAP5Q15398 846 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 PFKFB4Q16877 469 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 SMTNL2Q2TAL5 461 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 BTBD16Q32M84 506 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 ISM2Q6H9L7 571 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 C1orf228Q6PIY5 440 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 ZNF474Q6S9Z5 364 aaPredicted RBP2.8□□□□□ -1.96
SMAD1-203ENST00000502342 NOL8Q76FK4 1167 aaKnown RBP2.8□□□□□ -1.96
SMAD1-203ENST00000502342 CYB5R4Q7L1T6 521 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 CCDC117Q8IWD4 279 aaPredicted RBP2.8□□□□□ -1.96
SMAD1-203ENST00000502342 OR4N4Q8N0Y3 316 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 TMEM199Q8N511 208 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 C9orf106Q8NAJ2 232 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 OR1N1Q8NGS0 311 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 CLEC4CQ8WTT0 213 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 IP6K1Q92551 441 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 VCPIP1Q96JH7 1222 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 PIMREGQ9BSJ6 248 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 WACQ9BTA9 647 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 SORBS1Q9BX66 1292 aaKnown RBP2.8□□□□□ -1.96
SMAD1-203ENST00000502342 FAM234AQ9H0X4 552 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 EBF3Q9H4W6 596 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 KCNK9Q9NPC2 374 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 SEMA4BQ9NPR2 832 aaPredicted RBP2.8□□□□□ -1.96
SMAD1-203ENST00000502342 THSD1Q9NS62 852 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 MSRB1Q9NZV6 116 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 FBXO4Q9UKT5 387 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 LAMP3Q9UQV4 416 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 TNFSF13BQ9Y275 285 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 PCDHA10Q9Y5I2 948 aa2.8□□□□□ -1.96
SMAD1-203ENST00000502342 AGAP5A6NIR3 686 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 C3orf70A6NLC5 250 aaPredicted RBP2.79□□□□□ -1.96
SMAD1-203ENST00000502342 A6NNC1 897 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 LGALS16A8MUM7 142 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 RHODO00212 210 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 INSIG1O15503 277 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 LARGE1O95461 756 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 ALPLP05186 524 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 CDC25AP30304 524 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 FOXL2P58012 376 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 FAM3BP58499 235 aaPredicted RBP2.79□□□□□ -1.96
SMAD1-203ENST00000502342 TNFAIP2Q03169 654 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 PPATQ06203 517 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 SRSF1Q07955 248 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMAD1-203ENST00000502342 SF3A3Q12874 501 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMAD1-203ENST00000502342 PTK2BQ14289 1009 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 PTGR1Q14914 329 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 RPS6KA2Q15349 733 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 INPP5JQ15735 1006 aaPredicted RBP2.79□□□□□ -1.96
SMAD1-203ENST00000502342 C6orf10Q5SRN2 563 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 C10orf76Q5T2E6 689 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 ZNF549Q6P9A3 640 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 TMEM88Q6PEY1 159 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 LRIG3Q6UXM1 1119 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 ATG16L2Q8NAA4 619 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 FAM71BQ8TC56 605 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 TMEM174Q8WUU8 243 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 ZFPM2Q8WW38 1151 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 ASB5Q8WWX0 329 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 KAT2AQ92830 837 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 MSI2Q96DH6 328 aaKnown RBP2.79□□□□□ -1.96
SMAD1-203ENST00000502342 ADAD1Q96M93 576 aaKnown RBP2.79□□□□□ -1.96
SMAD1-203ENST00000502342 CAMK1GQ96NX5 476 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 TP63Q9H3D4 680 aaPredicted RBP2.79□□□□□ -1.96
SMAD1-203ENST00000502342 MLXIPQ9HAP2 919 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 FZD3Q9NPG1 666 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 LRFN1Q9P244 771 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 AGO2Q9UKV8 859 aaKnown RBP2.79□□□□□ -1.96
SMAD1-203ENST00000502342 ZBTB1Q9Y2K1 713 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 DAAM1Q9Y4D1 1078 aa2.79□□□□□ -1.96
SMAD1-203ENST00000502342 A0A087WV62 115 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 CYP3A7-CYP3A51PA0A087WV96 503 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 FAM90A10PA6NDY2 464 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 CXorf65A6NEN9 183 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 EFCAB8A8MWE9 144 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 PROB1E7EW31 1015 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 MSI1O43347 362 aaKnown RBP2.78□□□□□ -1.96
SMAD1-203ENST00000502342 TLX3O43711 291 aaPredicted RBP2.78□□□□□ -1.96
SMAD1-203ENST00000502342 SKAP2O75563 359 aaPredicted RBP2.78□□□□□ -1.96
SMAD1-203ENST00000502342 OAZ2O95190 189 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 ITGA2BP08514 1039 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 CYP3A4P08684 503 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 FGF2P09038 288 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 TNFRSF1BP20333 461 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 CYP3A7P24462 503 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 KCNJ4P48050 445 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 FOXG1P55316 489 aaPredicted RBP2.78□□□□□ -1.96
SMAD1-203ENST00000502342 POLE2P56282 527 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 ICA1Q05084 483 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 GALNT3Q14435 633 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 PUM3Q15397 648 aaKnown RBP2.78□□□□□ -1.96
SMAD1-203ENST00000502342 GPR162Q16538 588 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 ODF3L2Q3SX64 289 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 ZACNQ401N2 412 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 ARL13AQ5H913 290 aaPredicted RBP2.78□□□□□ -1.96
SMAD1-203ENST00000502342 PIK3CD-AS1Q5SR53 167 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 TTC39AQ5SRH9 613 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
SMAD1-203ENST00000502342 DAB2IPQ5VWQ8 1189 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms