RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SYNE3Q6ZMZ3 975 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZER1Q7Z7L7 766 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 LDHDQ86WU2 507 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 SCN4BQ8IWT1 228 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 RHOT2Q8IXI1 618 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 CCAR2Q8N163 923 aaKnown RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZBTB44Q8NCP5 570 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 NFKBIDQ8NI38 313 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 DENND1AQ8TEH3 1009 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 GRK7Q8WTQ7 553 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 FAM168AQ92567 244 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 RSC1A1Q92681 617 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 SPSB4Q96A44 273 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 ZNF653Q96CK0 615 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 RBM17Q96I25 401 aaKnown RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 C16orf45Q96MC5 204 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 HTATIP2Q9BUP3 242 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 MAK16Q9BXY0 300 aaKnown RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 MS4A7Q9GZW8 240 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 TNMDQ9H2S6 317 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 VEZTQ9HBM0 779 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 LANCL2Q9NS86 450 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 KCTD5Q9NXV2 234 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 FAM53CQ9NYF3 392 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 MRPL15Q9P015 296 aaKnown RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 WASF3Q9UPY6 502 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 EPN1Q9Y6I3 576 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 PARP4Q9UKK3 1724 aaKnown RBP4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 ANKRD26Q9UPS8 1709 aa4.58□□□□□ -1.68
HMGB1P21-201ENST00000502313 FAM208AQ9UK61 1670 aaKnown RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 CRB1P82279 1406 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 SMG6Q86US8 1419 aaKnown RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 KIF24Q5T7B8 1368 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 WDR17Q8IZU2 1322 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 A0A087WWL8 130 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 J3KTA2 159 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 PEX12O00623 359 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 WNT10BO00744 389 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 TSPAN4O14817 238 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 PEX10O60683 326 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 DIAPH2O60879 1101 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 COQ9O75208 318 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 SEMA7AO75326 666 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 SEC22BO75396 215 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 DNAJB5O75953 348 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 TFRCP02786 760 aaKnown RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 CD1AP06126 327 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 HMOX1P09601 288 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 TMIGD3P0DMS9 266 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 CYP2A6P11509 494 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 EEF2P13639 858 aaKnown RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 KRT13P13646 458 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 FPR1P21462 350 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 ACVR2AP27037 513 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 PCSK1P29120 753 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 CASQ1P31415 396 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 TCF7P36402 384 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 SREBF1P36956 1147 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 GP5P40197 560 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 PRPHP41219 470 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 CAPZA2P47755 286 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 AMPHP49418 695 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 STAT5BP51692 787 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 ANTXR2P58335 489 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 MPP7Q5T2T1 576 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 IRGCQ6NXR0 463 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 MED25Q71SY5 747 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 METTL23Q86XA0 190 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 UNC5BQ8IZJ1 945 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 ANKRD35Q8N283 1001 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 AOPEPQ8N6M6 819 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 POGLUT1Q8NBL1 392 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 SPATA18Q8TC71 538 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 MZB1Q8WU39 189 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 SLC22A18Q96BI1 424 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 RMDN1Q96DB5 314 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 FAM84AQ96KN4 292 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 YTHDC1Q96MU7 727 aaKnown RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 GCNAQ96QF7 691 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 MED15Q96RN5 788 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 GORASP1Q9BQQ3 440 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 FUT8Q9BYC5 575 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 FAM129AQ9BZQ8 928 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 PLEKHA2Q9HB19 425 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 FANCFQ9NPI8 374 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 FSCN3Q9NQT6 498 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 TMEM140Q9NV12 185 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 USP40Q9NVE5 1235 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 INTS10Q9NVR2 710 aaKnown RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 SELENONQ9NZV5 590 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 CGNQ9P2M7 1197 aaKnown RBP4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 CDC42EP3Q9UKI2 254 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 DUSP12Q9UNI6 340 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 CNTN6Q9UQ52 1028 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 VWA7Q9Y334 891 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 PMF1-BGLAPU3KQ54 211 aa4.57□□□□□ -1.68
HMGB1P21-201ENST00000502313 BLMP54132 1417 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P21-201ENST00000502313 MAP3K19Q56UN5 1328 aa4.56□□□□□ -1.68
HMGB1P21-201ENST00000502313 SYNJ2BP-COX16A0A087WUM0 186 aa4.56□□□□□ -1.68
HMGB1P21-201ENST00000502313 A0A1W2PR48 441 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms