RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 ZNF252P-AS1Q0IIN9 211 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 ACBD5Q5T8D3 534 aaPredicted RBP17.3■□□□□ 0.36
PRKCB-210ENST00000498739 EGFLAMQ63HQ2 1017 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 CHST9Q7L1S5 443 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 SLFN11Q7Z7L1 901 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 AHI1Q8N157 1196 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.3■□□□□ 0.36
PRKCB-210ENST00000498739 IL17RCQ8NAC3 791 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 TXNDC5Q8NBS9 432 aaKnown RBP17.3■□□□□ 0.36
PRKCB-210ENST00000498739 SPC24Q8NBT2 197 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 FIBINQ8TAL6 211 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 WFIKKN2Q8TEU8 576 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 FNIP1Q8TF40 1166 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 NTAN1Q96AB6 310 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 POLR3BQ9NW08 1133 aaPredicted RBP17.3■□□□□ 0.36
PRKCB-210ENST00000498739 FBXO4Q9UKT5 387 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 SLC8A2Q9UPR5 921 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 STARD13Q9Y3M8 1113 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 F5P12259 2224 aa17.3■□□□□ 0.36
PRKCB-210ENST00000498739 RNF8O76064 485 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 H2AFZP0C0S5 128 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 CHRM1P11229 460 aaPredicted RBP17.29■□□□□ 0.36
PRKCB-210ENST00000498739 LMAN2Q12907 356 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 DMC1Q14565 340 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 EIF4HQ15056 248 aaKnown RBP17.29■□□□□ 0.36
PRKCB-210ENST00000498739 HSF5Q4G112 596 aaPredicted RBP17.29■□□□□ 0.36
PRKCB-210ENST00000498739 FSCBQ5H9T9 825 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 TMEM215Q68D42 235 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 H2AFVQ71UI9 128 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 SYT13Q7L8C5 426 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 TRMT11Q7Z4G4 463 aaKnown RBP17.29■□□□□ 0.36
PRKCB-210ENST00000498739 KCNV2Q8TDN2 545 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 UCMAQ8WVF2 138 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 PANX2Q96RD6 677 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 ELOVL2Q9NXB9 296 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 CTTNBP2NLQ9P2B4 639 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 ANAPC7Q9UJX3 599 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 HCN2Q9UL51 889 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 MMP17Q9ULZ9 603 aa17.29■□□□□ 0.36
PRKCB-210ENST00000498739 ZNF318Q5VUA4 2279 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 ZDBF2Q9HCK1 2354 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.28■□□□□ 0.36
PRKCB-210ENST00000498739 SGK1O00141 431 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 PAPSS2O95340 614 aaPredicted RBP17.28■□□□□ 0.36
PRKCB-210ENST00000498739 SP9P0CG40 484 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 WASP42768 502 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 CDH4P55283 916 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 ZNF177Q13360 481 aaPredicted RBP17.28■□□□□ 0.36
PRKCB-210ENST00000498739 FUT11Q495W5 492 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 C5orf22Q49AR2 442 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 ALFQ53S48 1182 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 EFHC2Q5JST6 749 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 EOGTQ5NDL2 527 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.28■□□□□ 0.36
PRKCB-210ENST00000498739 KIAA0907Q7Z7F0 614 aaPredicted RBP17.28■□□□□ 0.36
PRKCB-210ENST00000498739 ZNF683Q8IZ20 524 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 CHPFQ8IZ52 775 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 ZNF564Q8TBZ8 553 aaPredicted RBP17.28■□□□□ 0.36
PRKCB-210ENST00000498739 BTBD6Q96KE9 485 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 ACOX2Q99424 681 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 MAGEB5Q9BZ81 275 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 OSBPL2Q9H1P3 480 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 MPP6Q9NZW5 540 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 KIAA1522Q9P206 1035 aaPredicted RBP17.28■□□□□ 0.36
PRKCB-210ENST00000498739 IMPACTQ9P2X3 320 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 OR12D3Q9UGF7 316 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 FZD10Q9ULW2 581 aa17.28■□□□□ 0.36
PRKCB-210ENST00000498739 DRGXA6NNA5 263 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 K7ESF4 209 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 CLDN11O75508 207 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 CNTN5O94779 1100 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 TMEM253P0C7T8 217 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 POLR2EP19388 210 aaKnown RBP17.27■□□□□ 0.36
PRKCB-210ENST00000498739 NTSR1P30989 418 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 HOXC13P31276 330 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 CSKP41240 450 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 AIF1P55008 147 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 SCAPQ12770 1279 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 MBLAC2Q68D91 279 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 SDE2Q6IQ49 451 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 ADIPOR2Q86V24 386 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 ARFGAP1Q8N6T3 406 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 SORCS1Q8WY21 1168 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 ATOH1Q92858 354 aaPredicted RBP17.27■□□□□ 0.36
PRKCB-210ENST00000498739 LMLNQ96KR4 655 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 HHIPQ96QV1 700 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 ZYG11BQ9C0D3 744 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 IRF2BPLQ9H1B7 796 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 CACNA2D2Q9NY47 1150 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 PCSK1NQ9UHG2 260 aa17.27■□□□□ 0.36
PRKCB-210ENST00000498739 IGLV3-10A0A075B6K4 115 aa17.26■□□□□ 0.35
PRKCB-210ENST00000498739 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
PRKCB-210ENST00000498739 FAM72CH0Y354 149 aa17.26■□□□□ 0.35
PRKCB-210ENST00000498739 TIMM44O43615 452 aa17.26■□□□□ 0.35
PRKCB-210ENST00000498739 ADAM23O75077 832 aa17.26■□□□□ 0.35
PRKCB-210ENST00000498739 LRCH4O75427 683 aa17.26■□□□□ 0.35
PRKCB-210ENST00000498739 MOCS3O95396 460 aa17.26■□□□□ 0.35
PRKCB-210ENST00000498739 TDGF1P13385 188 aa17.26■□□□□ 0.35
PRKCB-210ENST00000498739 HOXB2P14652 356 aa17.26■□□□□ 0.35
PRKCB-210ENST00000498739 HNRNPLP14866 589 aaKnown RBP eCLIP17.26■□□□□ 0.353e-7■■■□□ 14.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms