RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 SLC45A4Q5BKX6 768 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3GQ6DHY5 549 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3CQ6IPX1 549 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 USP30Q70CQ3 517 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 PRICKLE2Q7Z3G6 844 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 PIGZQ86VD9 579 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 SPATS2Q86XZ4 545 aaKnown RBP9.49□□□□□ -0.89
CCDC171-209ENST00000498725 C12orf56Q8IXR9 622 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 FAM217AQ8IXS0 508 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TBC1D3Q8IZP1 549 aaPredicted RBP9.49□□□□□ -0.89
CCDC171-209ENST00000498725 CARNMT1Q8N4J0 409 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 MYOCQ99972 504 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 C7orf25Q9BPX7 421 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 TRIM4Q9C037 500 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 OSBPL2Q9H1P3 480 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 CAAP1Q9H8G2 361 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 CGNQ9P2M7 1197 aaKnown RBP9.49□□□□□ -0.89
CCDC171-209ENST00000498725 CEP83Q9Y592 693 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 MYO18BQ8IUG5 2567 aa9.49□□□□□ -0.89
CCDC171-209ENST00000498725 B8ZZF3 427 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 PIK3R2O00459 728 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 TRIM38O00635 465 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 YKT6O15498 198 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 POLR2DO15514 142 aaKnown RBP9.48□□□□□ -0.89
CCDC171-209ENST00000498725 FFAR2O15552 330 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 SIGLEC6O43699 453 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 USP12O75317 370 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 ZBED1O96006 694 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 SYT1P21579 422 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 CSKP41240 450 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 CTSOP43234 321 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-209ENST00000498725 NXPH1P58417 271 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 CLDN10P78369 228 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 RHDQ02161 417 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 SFSWAPQ12872 951 aaKnown RBP9.48□□□□□ -0.89
CCDC171-209ENST00000498725 KMT5BQ4FZB7 885 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 C1orf220Q5T0J3 134 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 ADGRF1Q5T601 910 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 KIAA1614Q5VZ46 1190 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-209ENST00000498725 MMS22LQ6ZRQ5 1243 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 SND1Q7KZF4 910 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCDC171-209ENST00000498725 KIAA0907Q7Z7F0 614 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-209ENST00000498725 MFN1Q8IWA4 741 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 STK40Q8N2I9 435 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 AADATQ8N5Z0 425 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCDC171-209ENST00000498725 IQUBQ8NA54 791 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 TAS1R2Q8TE23 839 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 KCNE4Q8WWG9 221 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 MYO19Q96H55 970 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 DNAI2Q9GZS0 605 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 CUEDC2Q9H467 287 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 CYP3A43Q9HB55 503 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 OLA1Q9NTK5 396 aaKnown RBP9.48□□□□□ -0.89
CCDC171-209ENST00000498725 ADAMTS1Q9UHI8 967 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 CA5BQ9Y2D0 317 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 KNTC1P50748 2209 aa9.48□□□□□ -0.89
CCDC171-209ENST00000498725 SPTLC2O15270 562 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 WISP1O95388 367 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 IL1BP01584 269 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 NR3C1P04150 777 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 C6P13671 934 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 PDCP20941 246 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 SLC6A4P31645 630 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 CCR5P51681 352 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 VAMP7P51809 220 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 METAP1P53582 386 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 ADPRHP54922 357 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 PDE4CQ08493 712 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 ADIGQ0VDE8 80 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 GOLGA7BQ2TAP0 167 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 HNRNPA1L2Q32P51 320 aaKnown RBP9.47□□□□□ -0.89
CCDC171-209ENST00000498725 FOXD4L6Q3SYB3 417 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-209ENST00000498725 SFMBT2Q5VUG0 894 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-209ENST00000498725 BSPRYQ5W0U4 402 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 FOXR1Q6PIV2 292 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 SHC4Q6S5L8 630 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 FOXD4L3Q6VB84 417 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-209ENST00000498725 KANSL1Q7Z3B3 1105 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 CFAP52Q8N1V2 620 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 DCBLD1Q8N8Z6 715 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 CCDC150Q8NCX0 1101 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 GOLGA5Q8TBA6 731 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 TMC2Q8TDI7 906 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-209ENST00000498725 KLK6Q92876 244 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 TATDN2Q93075 761 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 RPL10LQ96L21 214 aaKnown RBP9.47□□□□□ -0.89
CCDC171-209ENST00000498725 IPO9Q96P70 1041 aaKnown RBP9.47□□□□□ -0.89
CCDC171-209ENST00000498725 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 LRRC4Q9HBW1 653 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 EXOC1Q9NV70 894 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 DMAC2Q9NW81 257 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 INTS6Q9UL03 887 aaKnown RBP9.47□□□□□ -0.89
CCDC171-209ENST00000498725 SCML1Q9UN30 329 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 ERVW-1Q9UQF0 538 aa9.47□□□□□ -0.89
CCDC171-209ENST00000498725 FRMD4BQ9Y2L6 1034 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms