RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 ASPHQ12797 758 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 PDCD2Q16342 344 aaPredicted RBP16.85■□□□□ 0.29
COL6A1-206ENST00000498614 FASTKD1Q53R41 847 aaKnown RBP16.85■□□□□ 0.29
COL6A1-206ENST00000498614 PPP1R14CQ8TAE6 165 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 SLC26A7Q8TE54 656 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 APBB2Q92870 758 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 KLC2Q9H0B6 622 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 SETD4Q9NVD3 440 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 IL1RAPL1Q9NZN1 696 aa16.85■□□□□ 0.29
COL6A1-206ENST00000498614 FAM159BA6NKW6 160 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 STRNO43815 780 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 OPHN1O60890 802 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 CYP2F1P24903 491 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 ADORA2BP29275 332 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 AQP4P55087 323 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 ARCQ7LC44 396 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 RTP4Q96DX8 246 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 FRMD8Q9BZ67 464 aaPredicted RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 SHCBP1LQ9BZQ2 653 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 KATNBL1Q9H079 304 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 DHX35Q9H5Z1 703 aaKnown RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 BCLAF3A2AJT9 711 aaKnown RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 CCNT2O60583 730 aaKnown RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 SNAI1O95863 264 aaPredicted RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 PDGFRBP09619 1106 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 CCDC130P13994 396 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 PEX2P28328 305 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 HOXA11P31270 313 aaPredicted RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 RPL10AP62906 217 aaKnown RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 GBE1Q04446 702 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 GRB14Q14449 540 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 TEDDM1Q5T9Z0 273 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 MBLAC2Q68D91 279 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 ZNF534Q76KX8 674 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 CATSPER4Q7RTX7 472 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 ARHGAP22Q7Z5H3 698 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 EZH1Q92800 747 aaPredicted RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 CCDC124Q96CT7 223 aaKnown RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 SNX27Q96L92 541 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 TBCBQ99426 244 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 ZNF670Q9BS34 389 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 UBE2OQ9C0C9 1292 aaKnown RBP16.84■□□□□ 0.29
COL6A1-206ENST00000498614 NRDE2Q9H7Z3 1164 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 CDHR5Q9HBB8 845 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 GJD2Q9UKL4 321 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 SORCS3Q9UPU3 1222 aa16.84■□□□□ 0.29
COL6A1-206ENST00000498614 MDM4O15151 490 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 LCP1P13796 627 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 CYP2B6P20813 491 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 L1CAMP32004 1257 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 DLG1Q12959 904 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 DCAF4L1Q3SXM0 396 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 ATG14Q6ZNE5 492 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 MAVSQ7Z434 540 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 RSPH3Q86UC2 560 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 WDR75Q8IWA0 830 aaKnown RBP16.83■□□□□ 0.28
COL6A1-206ENST00000498614 EFCAB3Q8N7B9 438 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 GSDMBQ8TAX9 411 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 PIWIL2Q8TC59 973 aaKnown RBP16.83■□□□□ 0.28
COL6A1-206ENST00000498614 GDPD5Q8WTR4 605 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 EMID1Q96A84 441 aaPredicted RBP16.83■□□□□ 0.28
COL6A1-206ENST00000498614 SIGLEC10Q96LC7 697 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 NDNQ99608 321 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 FAM124BQ9H5Z6 455 aaPredicted RBP16.83■□□□□ 0.28
COL6A1-206ENST00000498614 OCEL1Q9H607 264 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 SLC17A6Q9P2U8 582 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 EMCNQ9ULC0 261 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 NR2E3Q9Y5X4 410 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 SLC4A7Q9Y6M7 1214 aa16.83■□□□□ 0.28
COL6A1-206ENST00000498614 RBM47A0AV96 593 aaKnown RBP16.82■□□□□ 0.28
COL6A1-206ENST00000498614 SIN3BO75182 1162 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 METTL18O95568 372 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 PROCP04070 461 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 MMP3P08254 477 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 SETSIPP0DME0 302 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 FGF3P11487 239 aaPredicted RBP16.82■□□□□ 0.28
COL6A1-206ENST00000498614 UQCRBP14927 111 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 SMPD1P17405 629 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 DESP17661 470 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 MAGEA6P43360 314 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 COPAP53621 1224 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 SLC10A2Q12908 348 aaPredicted RBP16.82■□□□□ 0.28
COL6A1-206ENST00000498614 MED21Q13503 144 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 CCL14Q16627 93 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 SOWAHAQ2M3V2 549 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 PRAMEF19Q5SWL8 479 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 ZNF410Q86VK4 478 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 UNC5BQ8IZJ1 945 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 HIPK4Q8NE63 616 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 B4GALNT2Q8NHY0 566 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 DEPDC1BQ8WUY9 529 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 KLHL4Q9C0H6 718 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 NXF3Q9H4D5 531 aaKnown RBP16.82■□□□□ 0.28
COL6A1-206ENST00000498614 CYP4F11Q9HBI6 524 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 A6NJR5 290 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 SPATA31D3P0C874 917 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 AKAP5P24588 427 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 GRIA1P42261 906 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 SLC1A6P48664 564 aa16.82■□□□□ 0.28
COL6A1-206ENST00000498614 SLC27A1Q6PCB7 646 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms