RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RGS14O43566 566 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 CPA1P15085 419 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 TGM2P21980 687 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 SLC37A1P57057 533 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 SHBQ15464 509 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 SLC5A9Q2M3M2 681 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 KLHDC7AQ5VTJ3 777 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 PPP4R4Q6NUP7 873 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 FAM83HQ6ZRV2 1179 aaPredicted RBP4.38□□□□□ -1.71
SMC4-227ENST00000497984 KDELC2Q7Z4H8 507 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 TMPRSS12Q86WS5 348 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 NPIPB3Q92617 1050 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 PMM1Q92871 262 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 NUP62CLQ9H1M0 184 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 C6orf106Q9H6K1 298 aaPredicted RBP4.38□□□□□ -1.71
SMC4-227ENST00000497984 ZNF556Q9HAH1 456 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 PRDM16Q9HAZ2 1276 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 SLC8A2Q9UPR5 921 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 CORO2BQ9UQ03 480 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 PTGDR2Q9Y5Y4 395 aa4.38□□□□□ -1.71
SMC4-227ENST00000497984 A0A1B0GUV1 79 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 A0A1B0GVT2 93 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 OR6C75A6NL08 312 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 LCATP04180 440 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 MYL4P12829 197 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 FGFR2P21802 821 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 GABRB3P28472 473 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 RFX5P48382 616 aaPredicted RBP4.37□□□□□ -1.71
SMC4-227ENST00000497984 PCYT1AP49585 367 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 ABATP80404 500 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 TRAF1Q13077 416 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 GPS2Q13227 327 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 PRSS57Q6UWY2 283 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 Q6ZTK2 550 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 RNF152Q8N8N0 203 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 EIF3CQ99613 913 aaKnown RBP4.37□□□□□ -1.71
SMC4-227ENST00000497984 MAGEB5Q9BZ81 275 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 PCDHAC1Q9H158 963 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 MAGEH1Q9H213 219 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 KCNK9Q9NPC2 374 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 KRCC1Q9NPI7 259 aaPredicted RBP4.37□□□□□ -1.71
SMC4-227ENST00000497984 TBC1D14Q9P2M4 693 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 TCEAL9Q9UHQ7 104 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 G3BP2Q9UN86 482 aaKnown RBP4.37□□□□□ -1.71
SMC4-227ENST00000497984 EID1Q9Y6B2 187 aa4.37□□□□□ -1.71
SMC4-227ENST00000497984 SPRY3O43610 288 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 NEURL1O76050 574 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 ZNF432O94892 652 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 CAMTA2O94983 1202 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 NFATC1O95644 943 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 PPP1R3DO95685 299 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 PLGP00747 810 aaPredicted RBP4.36□□□□□ -1.71
SMC4-227ENST00000497984 PECAM1P16284 738 aaPredicted RBP4.36□□□□□ -1.71
SMC4-227ENST00000497984 ZNF543Q08ER8 600 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 P3H1Q32P28 736 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 ARHGAP15Q53QZ3 475 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 PRAMEF19Q5SWL8 479 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 MSANTD2Q6P1R3 559 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 SLC16A12Q6ZSM3 486 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 CYB5R4Q7L1T6 521 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 ADGRF3Q8IZF5 1079 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 JDP2Q8WYK2 163 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 GRAMD1AQ96CP6 724 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 PAAF1Q9BRP4 392 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 TM6SF1Q9BZW5 370 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.36□□□□□ -1.71
SMC4-227ENST00000497984 MYO1AQ9UBC5 1043 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 PLEKHB1Q9UF11 243 aaPredicted RBP4.36□□□□□ -1.71
SMC4-227ENST00000497984 PCDHGB1Q9Y5G3 927 aa4.36□□□□□ -1.71
SMC4-227ENST00000497984 RHPN2P1A8MT19 583 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 NPC1O15118 1278 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 GRID2O43424 1007 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 TSPAN6O43657 245 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 VIPP01282 170 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 CYP1A2P05177 515 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 PKMP14618 531 aaKnown RBP4.35□□□□□ -1.71
SMC4-227ENST00000497984 ARSBP15848 533 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 TSHRP16473 764 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 EGR1P18146 543 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 PIK3CBP42338 1070 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 COMPP49747 757 aaPredicted RBP4.35□□□□□ -1.71
SMC4-227ENST00000497984 PDLIM4P50479 330 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 ART1P52961 327 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 CBFBQ13951 182 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 IZUMO4Q1ZYL8 232 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 GABPB2Q8TAK5 448 aaPredicted RBP4.35□□□□□ -1.71
SMC4-227ENST00000497984 GDF15Q99988 308 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 TXNRD2Q9NNW7 524 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 FSCN3Q9NQT6 498 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 FBXO28Q9NVF7 368 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 ICAM5Q9UMF0 924 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 UBE2J1Q9Y385 318 aaPredicted RBP4.35□□□□□ -1.71
SMC4-227ENST00000497984 PCDHB7Q9Y5E2 793 aa4.35□□□□□ -1.71
SMC4-227ENST00000497984 A0A1W2PPC4 97 aa4.34□□□□□ -1.71
SMC4-227ENST00000497984 DDNO94850 711 aaPredicted RBP4.34□□□□□ -1.71
SMC4-227ENST00000497984 HOXD3P31249 432 aaPredicted RBP4.34□□□□□ -1.71
SMC4-227ENST00000497984 ERVFC1-1P60608 527 aa4.34□□□□□ -1.71
SMC4-227ENST00000497984 SHC2P98077 582 aa4.34□□□□□ -1.71
SMC4-227ENST00000497984 ENTPD8Q5MY95 495 aa4.34□□□□□ -1.71
SMC4-227ENST00000497984 KRT27Q7Z3Y8 459 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms