RNA–Protein interactions for RNA: ENST00000497870.1

PLS3-208, Transcript of plastin 3, human

TSL 4

Gene PLS3, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLS3-208	ENST00000497870	PDHA1	P08559	390 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	NPS	P0C0P6	89 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	CLCN2	P51788	898 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	RCAN1	P53805	252 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	NR1H2	P55055	460 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	CASP6	P55212	293 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	RPL15	P61313	204 aa	Known RBP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	SP2	Q02086	613 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	TFF2	Q03403	129 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	PDCL	Q13371	301 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	CAMK1	Q14012	370 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	GPR162	Q16538	588 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	GLE1	Q53GS7	698 aa	Known RBP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	ZNF484	Q5JVG2	852 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	TSTD2	Q5T7W7	516 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	ACAD10	Q6JQN1	1059 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870		Q6ZWC4	215 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	ZNF804A	Q7Z570	1209 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	SRFBP1	Q8NEF9	429 aa	Known RBP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	TBC1D22A	Q8WUA7	517 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	CTHRC1	Q96CG8	243 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	RRP36	Q96EU6	259 aa	Known RBP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	RBM17	Q96I25	401 aa	Known RBP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	MECR	Q9BV79	373 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	PAIP1	Q9H074	479 aa	Known RBP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	PLEKHA2	Q9HB19	425 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	CPNE5	Q9HCH3	593 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	ARHGEF3	Q9NR81	526 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	TFCP2L1	Q9NZI6	479 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	SERGEF	Q9UGK8	458 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	TRPC5	Q9UL62	973 aa	Predicted RBP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	CYP46A1	Q9Y6A2	500 aa		4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	TDRD9	Q8NDG6	1382 aa	Known RBP	4.38	□□□□□ -1.71
PLS3-208	ENST00000497870	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	CCDC187	A0A096LP49	1063 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	QSOX1	O00391	747 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	CES2	O00748	559 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	ZNF213	O14771	459 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	ZBED4	O75132	1171 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	TULP3	O75386	442 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	RNASEH2A	O75792	299 aa	Known RBP	4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	RTN3	O95197	1032 aa	Predicted RBP	4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	VNN1	O95497	513 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	WEE2	P0C1S8	567 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	CPA1	P15085	419 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	CHN1	P15882	459 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	NDUFB7	P17568	137 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	GPD1	P21695	349 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	CYP3A7	P24462	503 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	PAFAH1B1	P43034	410 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	TUB	P50607	506 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	JAK3	P52333	1124 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	TAS2R50	P59544	299 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	E2F1	Q01094	437 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	FOXD4	Q12950	439 aa	Predicted RBP	4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	HNRNPA0	Q13151	305 aa	Known RBP	4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	CYP1B1	Q16678	543 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	GRHL2	Q6ISB3	625 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	ENDOV	Q8N8Q3	282 aa	Known RBP	4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	UCMA	Q8WVF2	138 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	CENPI	Q92674	756 aa	Predicted RBP	4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	RNF125	Q96EQ8	232 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	PRR25	Q96S07	402 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	CD180	Q99467	661 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	AGXT2	Q9BYV1	514 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	TAOK3	Q9H2K8	898 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	CDCP1	Q9H5V8	836 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	PDE11A	Q9HCR9	933 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	AASS	Q9UDR5	926 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	ST3GAL5	Q9UNP4	418 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	SLC12A4	Q9UP95	1085 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	PCDHA10	Q9Y5I2	948 aa		4.37	□□□□□ -1.71
PLS3-208	ENST00000497870	GOLGA6L10	A0A0M3HER8	536 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	PEX12	O00623	359 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	CCNT1	O60563	726 aa	Known RBP	4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	HEXIM1	O94992	359 aa	Known RBP	4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	METTL18	O95568	372 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	TTLL1	O95922	423 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	ERBB2	P04626	1255 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	HSPA1A	P0DMV8	641 aa	Known RBP	4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	HSPA1B	P0DMV9	641 aa	Known RBP	4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	NR2F6	P10588	404 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	ATP1A3	P13637	1013 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	IGFBP2	P18065	325 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	PSMA4	P25789	261 aa	Known RBP	4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	SLC8A1	P32418	973 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	MCM5	P33992	734 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	OAZ1	P54368	228 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	RPP30	P78346	268 aa	Known RBP	4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	KRTAP1-1	Q07627	177 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	RUNDC3A	Q59EK9	446 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	AKNAD1	Q5T1N1	836 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	LRCH2	Q5VUJ6	765 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	CFAP161	Q6P656	301 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	NEK10	Q6ZWH5	1172 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	AMIGO2	Q86SJ2	522 aa		4.36	□□□□□ -1.71
PLS3-208	ENST00000497870	RASAL3	Q86YV0	1011 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms