RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 TCAF2A6NFQ2 919 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 PROB1E7EW31 1015 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 AXIN1O15169 862 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 ADAM23O75077 832 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 MOCS3O95396 460 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 ATP5BP06576 529 aaKnown RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 CHRM1P11229 460 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 HNRNPLP14866 589 aaKnown RBP eCLIP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 CD70P32970 193 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 CNR2P34972 360 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 GGCXP38435 758 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 ZNF143P52747 638 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 OXCT1P55809 520 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 MAMLD1Q13495 774 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 FNDC3BQ53EP0 1204 aaKnown RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 SERPINA13PQ6UXR4 307 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 TMEM92Q6UXU6 159 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 CEP68Q76N32 757 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 STRADAQ7RTN6 431 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 WDR5BQ86VZ2 330 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 CIR1Q86X95 450 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 CCAR2Q8N163 923 aaKnown RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 OLIG1Q8TAK6 271 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 WFDC5Q8TCV5 224 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 SORCS1Q8WY21 1168 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 HAPLN3Q96S86 360 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 ACOX2Q99424 681 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 CNPY3Q9BT09 278 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 RBSNQ9H1K0 784 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 DEF6Q9H4E7 631 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 KIAA1522Q9P206 1035 aaPredicted RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 CNOT8Q9UFF9 292 aaKnown RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 RAB23Q9ULC3 237 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 SCINQ9Y6U3 715 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 MYO15AQ9UKN7 3530 aa12.12□□□□□ -0.47
MRPL55-234ENST00000497758 RIF1Q5UIP0 2472 aaKnown RBP12.12□□□□□ -0.47
MRPL55-234ENST00000497758 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 TCRBV5S1A1TA0A578 114 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 SYNCRIPO60506 623 aaKnown RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 LILRB5O75023 590 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 ENDOD1O94919 500 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 LMNAP02545 664 aaKnown RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 PLEKP08567 350 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 HOXC13P31276 330 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 HNRNPH3P31942 346 aaKnown RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 RPL7AP62424 266 aaKnown RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 LMAN2Q12907 356 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 ZNF177Q13360 481 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 ZNF234Q14588 700 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 FUT11Q495W5 492 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 SH3PXD2AQ5TCZ1 1133 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 MBLAC2Q68D91 279 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 SCYL2Q6P3W7 929 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 PRR23BQ6ZRT6 265 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 TMC6Q7Z403 805 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 BNIPLQ7Z465 357 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 ADIPOR2Q86V24 386 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 DNAAF5Q86Y56 855 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 CNGA4Q8IV77 575 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 DRC7Q8IY82 874 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 PGBD3Q8N328 593 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 CYB5D2Q8WUJ1 264 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 HMGB4Q8WW32 186 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 IGSF8Q969P0 613 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 C1orf74Q96LT6 269 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 PPP1R9BQ96SB3 815 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 DNAJC7Q99615 494 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 GABRG3Q99928 467 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 MRPL47Q9HD33 250 aaKnown RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 ANLNQ9NQW6 1124 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 THAP10Q9P2Z0 257 aaPredicted RBP12.11□□□□□ -0.47
MRPL55-234ENST00000497758 MYO1AQ9UBC5 1043 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 EBF1Q9UH73 591 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 HCN2Q9UL51 889 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 SNX10Q9Y5X0 201 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 STON1Q9Y6Q2 735 aa12.11□□□□□ -0.47
MRPL55-234ENST00000497758 MYO18AQ92614 2054 aaKnown RBP12.1□□□□□ -0.47
MRPL55-234ENST00000497758 GPR179Q6PRD1 2367 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 E9PAM4 449 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 CCP110O43303 1012 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 GFRA3O60609 400 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 SRGAP2O75044 1071 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 MFAP3LO75121 409 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 CLDN11O75508 207 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 RPP40O75818 363 aaKnown RBP12.1□□□□□ -0.47
MRPL55-234ENST00000497758 ASLP04424 464 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 DLDP09622 509 aaKnown RBP12.1□□□□□ -0.47
MRPL55-234ENST00000497758 PSMA2P25787 234 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 ADRA1BP35368 520 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 EIF4A3P38919 411 aaKnown RBP12.1□□□□□ -0.47
MRPL55-234ENST00000497758 CSKP41240 450 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 MRE11P49959 708 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 CDH4P55283 916 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 HDAC4P56524 1084 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 ST8SIA6P61647 398 aa12.1□□□□□ -0.47
MRPL55-234ENST00000497758 SLC12A1Q13621 1099 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms