RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	GK5	Q6ZS86	529 aa		10.88	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	RNF135	Q8IUD6	432 aa		10.88	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SPATA6L	Q8N4H0	392 aa		10.88	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	UBR7	Q8N806	425 aa		10.88	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	MAPK15	Q8TD08	544 aa		10.88	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	EIF2A	Q9BY44	585 aa	Known RBP	10.88	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	UTP6	Q9NYH9	597 aa	Known RBP	10.88	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	DENR	O43583	198 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	VAPB	O95292	243 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TCEA1	P23193	301 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	MIP	P30301	263 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	RAP1GAP	P47736	663 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CD151	P48509	253 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	HSPA13	P48723	471 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TUFM	P49411	452 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	DGKD	Q16760	1214 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	MGAT5B	Q3V5L5	792 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ZBTB41	Q5SVQ8	909 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SH3PXD2A	Q5TCZ1	1133 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TDRD10	Q5VZ19	366 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TMEM143	Q96AN5	459 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	KLHL32	Q96NJ5	620 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SLC39A3	Q9BRY0	314 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	MSTO1	Q9BUK6	570 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	RBM38	Q9H0Z9	239 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	C1orf21	Q9H246	121 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CCDC68	Q9H2F9	335 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ZNF696	Q9H7X3	374 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	POLI	Q9UNA4	740 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	RNF11	Q9Y3C5	154 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597		A0A087WXM4	84 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597		A0A1W2PQ67	120 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CLOCK	O15516	846 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	JAK1	P23458	1154 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ALDH4A1	P30038	563 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	GRIA3	P42263	894 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	RAD23A	P54725	363 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	OCA2	Q04671	838 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SLC15A2	Q16348	729 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	UGCG	Q16739	394 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	C15orf59	Q2T9L4	293 aa	Predicted RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TEX44	Q53QW1	395 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SCARA3	Q6AZY7	606 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	HERC6	Q8IVU3	1022 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	DNAAF3	Q8N9W5	541 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SLC4A11	Q8NBS3	891 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	OR5B17	Q8NGF7	314 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	UBA3	Q8TBC4	463 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	BEGAIN	Q9BUH8	593 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TARS2	Q9BW92	718 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	UPF3A	Q9H1J1	476 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	EPB41L1	Q9H4G0	881 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	APOBEC3G	Q9HC16	384 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CYP26B1	Q9NR63	512 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	PNPLA3	Q9NST1	481 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	EGFL7	Q9UHF1	273 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	AGO2	Q9UKV8	859 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CDY2A	Q9Y6F7	541 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CDY1	Q9Y6F8	540 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	PSMD11	O00231	422 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	GLRA3	O75311	464 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ADAM17	P78536	824 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ZNF252P-AS1	Q0IIN9	211 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ENOSF1	Q7L5Y1	443 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ZC3H7A	Q8IWR0	971 aa	Known RBP	10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SLC15A4	Q8N697	577 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	RSPH1	Q8WYR4	309 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ZNF516	Q92618	1163 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	APOL2	Q9BQE5	337 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ADPGK	Q9BRR6	497 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TASP1	Q9H6P5	420 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	EFCAB1	Q9HAE3	211 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	XPNPEP3	Q9NQH7	507 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TMEM98	Q9Y2Y6	226 aa		10.87	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	GAK	O14976	1311 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	COL4A1	P02462	1669 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	NUP188	Q5SRE5	1749 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	IGLV3-22	A0A075B6J6	115 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	KCNU1	A8MYU2	1149 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	NRP1	O14786	923 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	LRCH4	O75427	683 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	PIGN	O95427	931 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	POLR2B	P30876	1174 aa	Known RBP	10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	BMX	P51813	675 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	NAGLU	P54802	743 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	GCNT1	Q02742	428 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	RAB6C	Q53S08	254 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ELMSAN1	Q6PJG2	1045 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	MOXD1	Q6UVY6	613 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CBR4	Q8N4T8	237 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ZC3H15	Q8WU90	426 aa	Known RBP	10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	PPP1R14B	Q96C90	147 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	RAB6C	Q9H0N0	254 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ZFYVE28	Q9HCC9	887 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SLC38A7	Q9NVC3	462 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ATAD3A	Q9NVI7	634 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TBCCD1	Q9NVR7	557 aa		10.86	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	DDTL	A6NHG4	134 aa	Predicted RBP	10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms