RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 TRAV19A0A0A6YYK7 116 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 C5orf60A6NFR6 353 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 GRXCR1A8MXD5 290 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 GCATO75600 419 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 OLFM2O95897 454 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 TBX18O95935 607 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 HMBSP08397 361 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 SPATA31D3P0C874 917 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 MYOGP15173 224 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 DNAJB1P25685 340 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 RBL1P28749 1068 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 MAPKAPK2P49137 400 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 PPIDQ08752 370 aaKnown RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 GALNT2Q10471 571 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 AUHQ13825 339 aaKnown RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 PRKD1Q15139 912 aaPredicted RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 TRADDQ15628 312 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 ARHGAP15Q53QZ3 475 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 RABGAP1LQ5R372 815 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 CFAP58Q5T655 872 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 PIK3R6Q5UE93 754 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 TTC39BQ5VTQ0 682 aaPredicted RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 TIGD7Q6NT04 549 aaPredicted RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 ARHGEF18Q6ZSZ5 1173 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 SPATA31D4Q6ZUB0 917 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 PPIL6Q8IXY8 311 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 GDF15Q99988 308 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 KLF16Q9BXK1 252 aaPredicted RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 FRMD8Q9BZ67 464 aaPredicted RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 KLC2Q9H0B6 622 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 USP29Q9HBJ7 922 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 ZNF334Q9HCZ1 680 aaPredicted RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 MAN1C1Q9NR34 630 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 ZDHHC7Q9NXF8 308 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 LSM7Q9UK45 103 aaKnown RBP12.53□□□□□ -0.4
HPS1-213ENST00000497527 VANGL2Q9ULK5 521 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 ZNF510Q9Y2H8 683 aa12.53□□□□□ -0.4
HPS1-213ENST00000497527 CHD5Q8TDI0 1954 aa12.52□□□□□ -0.4
HPS1-213ENST00000497527 TYW5A2RUC4 315 aaKnown RBP12.52□□□□□ -0.41
HPS1-213ENST00000497527 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 DRGXA6NNA5 263 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 MAP2K7O14733 419 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 CHADO15335 359 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 OPHN1O60890 802 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 CLASP2O75122 1294 aaKnown RBP12.52□□□□□ -0.41
HPS1-213ENST00000497527 HDCP19113 662 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 TACR2P21452 398 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 RPL22P35268 128 aaKnown RBP12.52□□□□□ -0.41
HPS1-213ENST00000497527 FDFT1P37268 417 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 GARSP41250 739 aaKnown RBP12.52□□□□□ -0.41
HPS1-213ENST00000497527 NDST2P52849 883 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 EPHA5P54756 1037 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 GDF10P55107 478 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 SLC7A9P82251 487 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 DHX9Q08211 1270 aaKnown RBP12.52□□□□□ -0.41
HPS1-213ENST00000497527 AP1B1Q10567 949 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 SLC10A2Q12908 348 aaPredicted RBP12.52□□□□□ -0.41
HPS1-213ENST00000497527 C5orf22Q49AR2 442 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 ALS2CLQ60I27 953 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 PPP2R2DQ66LE6 453 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 RAP1GAP2Q684P5 730 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 HIBCHQ6NVY1 386 aaPredicted RBP12.52□□□□□ -0.41
HPS1-213ENST00000497527 RHBDF2Q6PJF5 856 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 TMC8Q8IU68 726 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 CCDC13Q8IYE1 715 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 ATPAF2Q8N5M1 289 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 CCNYQ8ND76 341 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 SLC22A17Q8WUG5 538 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 RPRD1AQ96P16 312 aaPredicted RBP12.52□□□□□ -0.41
HPS1-213ENST00000497527 LRRC3Q9BY71 257 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 NEUROG2Q9H2A3 272 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 ATXN3LQ9H3M9 355 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 PRDM12Q9H4Q4 367 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 SLC28A3Q9HAS3 691 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 TRPC7Q9HCX4 862 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 TMEM248Q9NWD8 314 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 ZNF446Q9NWS9 450 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 YBX2Q9Y2T7 364 aaKnown RBP12.52□□□□□ -0.41
HPS1-213ENST00000497527 SNX10Q9Y5X0 201 aa12.52□□□□□ -0.41
HPS1-213ENST00000497527 A0A0A0MRY4 1105 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 ARHGAP42A6NI28 874 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 EIF3HO15372 352 aaKnown RBP eCLIP12.51□□□□□ -0.41
HPS1-213ENST00000497527 CCL16O15467 120 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 PPFIA2O75334 1257 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 STC2O76061 302 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 MYL4P12829 197 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 ETS1P14921 441 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 CCNCP24863 283 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 BMP8BP34820 402 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 IRS1P35568 1242 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 GGCXP38435 758 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 YBEYP58557 167 aaPredicted RBP12.51□□□□□ -0.41
HPS1-213ENST00000497527 BASP1P80723 227 aaKnown RBP12.51□□□□□ -0.41
HPS1-213ENST00000497527 SARNPP82979 210 aaKnown RBP12.51□□□□□ -0.41
HPS1-213ENST00000497527 CAMK1Q14012 370 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 ANO4Q32M45 955 aa12.51□□□□□ -0.41
HPS1-213ENST00000497527 RNASEH2BQ5TBB1 312 aaKnown RBP12.51□□□□□ -0.41
HPS1-213ENST00000497527 ITPRIPL1Q6GPH6 555 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms